Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0902X.Seq
         (548 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC075810-1|AAH75810.1|  298|Homo sapiens chromosome 6 open readi...    31   2.0  
BC010184-1|AAH10184.1|  298|Homo sapiens chromosome 6 open readi...    31   2.0  
BC002328-1|AAH02328.1|  298|Homo sapiens chromosome 6 open readi...    31   2.0  
AL451165-2|CAH70507.1|  298|Homo sapiens RP3-391O22.4 protein.         31   2.0  
AL031577-4|CAI20395.1|  224|Homo sapiens RP3-391O22.4 protein.         31   2.0  
AL031577-3|CAI20393.1|  298|Homo sapiens RP3-391O22.4 protein.         31   2.0  
AK055596-1|BAB70967.1|  141|Homo sapiens protein ( Homo sapiens ...    31   2.0  

>BC075810-1|AAH75810.1|  298|Homo sapiens chromosome 6 open reading
           frame 106 protein.
          Length = 298

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 287 AGA*AHQPGRCLKYVHGGEYHAYNPDVVRTLQ 192
           +GA A  PG CLKYV G ++   N  +VR+L+
Sbjct: 104 SGAEAWPPGVCLKYVGGDQFGHVNMVMVRSLE 135


>BC010184-1|AAH10184.1|  298|Homo sapiens chromosome 6 open reading
           frame 106 protein.
          Length = 298

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 287 AGA*AHQPGRCLKYVHGGEYHAYNPDVVRTLQ 192
           +GA A  PG CLKYV G ++   N  +VR+L+
Sbjct: 104 SGAEAWPPGVCLKYVGGDQFGHVNMVMVRSLE 135


>BC002328-1|AAH02328.1|  298|Homo sapiens chromosome 6 open reading
           frame 106 protein.
          Length = 298

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 287 AGA*AHQPGRCLKYVHGGEYHAYNPDVVRTLQ 192
           +GA A  PG CLKYV G ++   N  +VR+L+
Sbjct: 104 SGAEAWPPGVCLKYVGGDQFGHVNMVMVRSLE 135


>AL451165-2|CAH70507.1|  298|Homo sapiens RP3-391O22.4 protein.
          Length = 298

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 287 AGA*AHQPGRCLKYVHGGEYHAYNPDVVRTLQ 192
           +GA A  PG CLKYV G ++   N  +VR+L+
Sbjct: 104 SGAEAWPPGVCLKYVGGDQFGHVNMVMVRSLE 135


>AL031577-4|CAI20395.1|  224|Homo sapiens RP3-391O22.4 protein.
          Length = 224

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 287 AGA*AHQPGRCLKYVHGGEYHAYNPDVVRTLQ 192
           +GA A  PG CLKYV G ++   N  +VR+L+
Sbjct: 30  SGAEAWPPGVCLKYVGGDQFGHVNMVMVRSLE 61


>AL031577-3|CAI20393.1|  298|Homo sapiens RP3-391O22.4 protein.
          Length = 298

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 287 AGA*AHQPGRCLKYVHGGEYHAYNPDVVRTLQ 192
           +GA A  PG CLKYV G ++   N  +VR+L+
Sbjct: 104 SGAEAWPPGVCLKYVGGDQFGHVNMVMVRSLE 135


>AK055596-1|BAB70967.1|  141|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31034 fis, clone HSYRA1000178. ).
          Length = 141

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = +1

Query: 286 ATHVSTDSADPAGSLQSLLHQCG----*PPPGSTGALHHRVDRPLQTVSSSGKRR 438
           A+ +S+   DP G ++SLL+  G     P PG TGA + +V    QT SS   R+
Sbjct: 32  ASQLSSQDQDPLGHIKSLLYPFGFPVELPRPGPTGA-YKKVKNQNQTTSSELLRK 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,818,228
Number of Sequences: 237096
Number of extensions: 1752149
Number of successful extensions: 4043
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4043
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)