Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0901.Seq
         (730 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X57829-1|CAA40962.1|  422|Homo sapiens serotonin 5-HT1a receptor...    30   9.8  
X13556-1|CAA31908.1|  421|Homo sapiens protein ( Human gene for ...    30   9.8  
M83181-1|AAA66493.1|  422|Homo sapiens serotonin receptor protein.     30   9.8  
M28269-1|AAA36440.1|  421|Homo sapiens guanine nucleotide-bindin...    30   9.8  
BC069159-1|AAH69159.1|  422|Homo sapiens 5-hydroxytryptamine (se...    30   9.8  
AJ781317-1|CAH03197.1|  422|Homo sapiens 5-hydroxytryptamine rec...    30   9.8  
AF498978-1|AAM21125.1|  422|Homo sapiens 5-hydroxytryptamine rec...    30   9.8  
AB041403-1|BAA94488.1|  422|Homo sapiens serotonin receptor 1A p...    30   9.8  

>X57829-1|CAA40962.1|  422|Homo sapiens serotonin 5-HT1a receptor
           protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 629 GRIVCDNISSLVVFVKTNKVLKPTAFPRDTSWAIMSPIKRID 504
           G++ CD   +L V   T+ +L   A   D  WAI  PI  ++
Sbjct: 105 GQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVN 146


>X13556-1|CAA31908.1|  421|Homo sapiens protein ( Human gene for
           plasma membrane receptor. ).
          Length = 421

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 629 GRIVCDNISSLVVFVKTNKVLKPTAFPRDTSWAIMSPIKRID 504
           G++ CD   +L V   T+ +L   A   D  WAI  PI  ++
Sbjct: 105 GQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVN 146


>M83181-1|AAA66493.1|  422|Homo sapiens serotonin receptor protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 629 GRIVCDNISSLVVFVKTNKVLKPTAFPRDTSWAIMSPIKRID 504
           G++ CD   +L V   T+ +L   A   D  WAI  PI  ++
Sbjct: 105 GQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVN 146


>M28269-1|AAA36440.1|  421|Homo sapiens guanine nucleotide-binding
           regulatory protein-coupled receptor protein.
          Length = 421

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 629 GRIVCDNISSLVVFVKTNKVLKPTAFPRDTSWAIMSPIKRID 504
           G++ CD   +L V   T+ +L   A   D  WAI  PI  ++
Sbjct: 105 GQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVN 146


>BC069159-1|AAH69159.1|  422|Homo sapiens 5-hydroxytryptamine
           (serotonin) receptor 1A protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 629 GRIVCDNISSLVVFVKTNKVLKPTAFPRDTSWAIMSPIKRID 504
           G++ CD   +L V   T+ +L   A   D  WAI  PI  ++
Sbjct: 105 GQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVN 146


>AJ781317-1|CAH03197.1|  422|Homo sapiens 5-hydroxytryptamine
           receptor 1A protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 629 GRIVCDNISSLVVFVKTNKVLKPTAFPRDTSWAIMSPIKRID 504
           G++ CD   +L V   T+ +L   A   D  WAI  PI  ++
Sbjct: 105 GQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVN 146


>AF498978-1|AAM21125.1|  422|Homo sapiens 5-hydroxytryptamine
           receptor 1A protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 629 GRIVCDNISSLVVFVKTNKVLKPTAFPRDTSWAIMSPIKRID 504
           G++ CD   +L V   T+ +L   A   D  WAI  PI  ++
Sbjct: 105 GQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVN 146


>AB041403-1|BAA94488.1|  422|Homo sapiens serotonin receptor 1A
           protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 629 GRIVCDNISSLVVFVKTNKVLKPTAFPRDTSWAIMSPIKRID 504
           G++ CD   +L V   T+ +L   A   D  WAI  PI  ++
Sbjct: 105 GQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVN 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,521,168
Number of Sequences: 237096
Number of extensions: 1823932
Number of successful extensions: 3633
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3633
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)