Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0897.Seq
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0225 + 18953016-18954686                                         29   4.6  
02_02_0032 - 6227556-6227926,6228322-6231085                           28   8.1  

>03_04_0225 + 18953016-18954686
          Length = 556

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +2

Query: 122 AALKTEAALHENLLADVTNTFEETDDLKTAANAWYIH--SNFDRNYLTVLAAYTDT 283
           AAL+        +L  +    ++T   K A     +H  + +  NYL +LA Y DT
Sbjct: 285 AALRNAGNAARGILMSLEQAIQKTTSSKAAVTGSAVHPLTRYVMNYLVLLADYEDT 340


>02_02_0032 - 6227556-6227926,6228322-6231085
          Length = 1044

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = -3

Query: 674 MKLGHSLNVNSILKIINKLNYSVQRFFGKTLVIIILQIEGVFLS 543
           +++G+ +N+ SI    N+LN  +    GK +++  L +EG  L+
Sbjct: 629 LEIGNLINLGSISISNNRLNGEIPSTLGKCVLLEYLHMEGNLLT 672


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,872,754
Number of Sequences: 37544
Number of extensions: 266198
Number of successful extensions: 543
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)