Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0896.Seq
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.2  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   5.5  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   5.5  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   9.6  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 315  QSPLECWPP*KLLVQRRQAQAYTVP 241
            +S +  W P KL VQR  + A T+P
Sbjct: 1205 RSSIRNWYPDKLTVQRNPSAATTLP 1229


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 189 GSKWCITYIFLCCYRTCVYTLS 124
           G   C T+ F+C Y   + TLS
Sbjct: 225 GFSTCYTFTFICLYLFFIITLS 246


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 86  IFFELLCRDLNMLERVYTQVR 148
           I F+ +CRD+  L R+Y   R
Sbjct: 218 IEFQKVCRDIEYLTRLYVSYR 238


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 11/53 (20%), Positives = 19/53 (35%)
 Frame = +1

Query: 109  GSQHVGKGVHTSSVTTEKNVCYAPFGALQPRATKEGRIKCTLIPGDGVGLSLS 267
            G   +G+G+HT  +         PF  +    T   ++  T       G  L+
Sbjct: 1025 GGTEMGQGLHTKMIQVAATALGIPFDRIHISETSTDKVPNTSATAASAGSDLN 1077


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,874
Number of Sequences: 2352
Number of extensions: 17961
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)