Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0896.Seq
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical pr...   155   4e-38
AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical ...   101   4e-22
Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical pr...    93   2e-19
Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical pr...    83   2e-16
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ...    31   0.84 
U41270-5|AAA82442.2|  364|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical
           protein C37E2.1 protein.
          Length = 379

 Score =  155 bits (375), Expect = 4e-38
 Identities = 85/162 (52%), Positives = 107/162 (66%), Gaps = 5/162 (3%)
 Frame = +3

Query: 255 PELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVNK-ICIKGILATPDF 431
           PEL+Y VQ++ K   IP++FE  F SEV+ T S+ +E+ V SI  N  + +KG +     
Sbjct: 55  PELIYTVQDIVKQTGIPIEFEEIFLSEVHYTRSSSIENAVESIGRNNNVALKGAIEESAV 114

Query: 432 SHT-GELQTLNMKLRNALDLYANVVQ*VIAQREVQAPGRGLHH---HQRTDRREYSALEH 599
            HT GELQ LNM+LR +LDL+ANVV            G+ L      ++T+  EYS+LEH
Sbjct: 115 LHTEGELQGLNMRLRRSLDLFANVVHIKTLDGIKTRHGKQLDFVIVREQTEG-EYSSLEH 173

Query: 600 ESVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHK 725
           E VPGV+ECLKI T  K+ERIAKFAFDYA K GRKKVTAVHK
Sbjct: 174 ELVPGVIECLKISTRTKAERIAKFAFDYATKTGRKKVTAVHK 215


>AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical
           protein C30F12.7 protein.
          Length = 373

 Score =  101 bits (243), Expect = 4e-22
 Identities = 60/158 (37%), Positives = 89/158 (56%), Gaps = 1/158 (0%)
 Frame = +3

Query: 255 PELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFS 434
           PE++  ++ +F     PV+FE    S  +  L   ++  + +I  N + IKG + T    
Sbjct: 48  PEMIAHIRNIFSFCHAPVNFEEVQVS--SSLLDGDMDAAMLAIERNGVAIKGNIETKH-- 103

Query: 435 HTGELQTLNMKLRNALDLYANVVQ*V-IAQREVQAPGRGLHHHQRTDRREYSALEHESVP 611
              +  + N++LR  LDLYAN++  V I     +  G  +   +     EYS LEHE+VP
Sbjct: 104 DDPQFNSRNVELRTKLDLYANILHCVTIPTVPTRHSGIDIVLIRENTEGEYSGLEHEAVP 163

Query: 612 GVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHK 725
           G+VE +KI+T  K ERI++ AF+YA   GRKKVTAVHK
Sbjct: 164 GIVESIKIVTREKIERISRMAFEYAKANGRKKVTAVHK 201


>Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical
           protein F35G12.2 protein.
          Length = 396

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 5/162 (3%)
 Frame = +3

Query: 255 PELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFS 434
           PE+++ V+ +  A   PVDFE    +      S  L + + +I  N + +KG + T  F 
Sbjct: 64  PEMLHHVERILSAVQAPVDFEVVNLTSKEDA-SEDLAEAITAIKRNGVALKGNIETK-FD 121

Query: 435 HTGELQTLNMKLRNALDLYANVVQ*-VIAQREVQAPGRGLHHHQRTDRREYSALEHESV- 608
           +   +   N++LR  L+LYANV+    I     +  G  +   +     EYS  EHE+V 
Sbjct: 122 NPSFVSR-NLELRRQLNLYANVLHCSTIPTVPSRHTGIDMVIIRENTEGEYSGNEHEAVN 180

Query: 609 ---PGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHK 725
              P VVE LK++T  KSE+I +FAF +A K GRKKVTAVHK
Sbjct: 181 APHPRVVESLKVVTREKSEQITRFAFQFAKKYGRKKVTAVHK 222


>Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical
           protein F43G9.1 protein.
          Length = 358

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
 Frame = +3

Query: 255 PELVYAVQEVFKAASIPVDFESFFFSEV---NPTLSAPLEDVVNSIAVNKICIKGILATP 425
           PE+  +VQ++F+AA  P+ ++    + V   +     P    +  +  NK+ +KG L TP
Sbjct: 37  PEISASVQKIFEAADAPIAWDPVDVTPVKGRDGVFRIPSR-CIELMHANKVGLKGPLETP 95

Query: 426 DFSHTGELQTLNMKLRNALDLYANV--VQ*VIAQREVQAPGRGLHHHQRTDRREYSALEH 599
                G  ++LN+ +R    LYANV   + +   + +      +   + T+  EYS +EH
Sbjct: 96  --IGKGH-RSLNLAVRKEFSLYANVRPCRSLEGHKTLYDNVDVVTIRENTEG-EYSGIEH 151

Query: 600 ESVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHK 725
           E VPGVV+ +K+IT   S  +A FAF+YA + GRK VTAVHK
Sbjct: 152 EIVPGVVQSIKLITETASRNVASFAFEYARQNGRKVVTAVHK 193


>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
            protein K10E9.1 protein.
          Length = 1451

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = +3

Query: 228  HLDSWGRCRPELVYAVQEVFKAASIPVDFESF----FFSEVNPTLSAPLEDVVNSIAVNK 395
            HL+ + R   ++ ++V++  K+    +DFE      F+ ++N  L+   ED + S     
Sbjct: 804  HLEHFERFETKIAFSVEKFLKSGIDGIDFEDLGLVEFYKQLNENLT---EDAIRSNEARN 860

Query: 396  ICIKGILAT 422
            I I  IL+T
Sbjct: 861  IYIVDILST 869


>U41270-5|AAA82442.2|  364|Caenorhabditis elegans Hypothetical
           protein AH9.4 protein.
          Length = 364

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 393 KICIKGILATPDFSHTGELQTLNMKLRNAL 482
           +  I G   T  FSHTGE  TL+ K   AL
Sbjct: 217 RYAISGPATTKRFSHTGETDTLDNKAHVAL 246


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,609,734
Number of Sequences: 27780
Number of extensions: 404683
Number of successful extensions: 1169
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)