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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0890.Seq
         (653 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc...    49   7e-07
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz...    47   2e-06
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo...    43   3e-05
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc...    40   4e-04
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm...    34   0.016
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    32   0.063
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||...    28   1.4  
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|...    27   3.1  
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar...    26   5.5  
SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac...    26   5.5  
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce...    25   7.2  
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    25   7.2  
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    25   7.2  
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13...    25   9.5  
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo...    25   9.5  
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha...    25   9.5  
SPBC13A2.03 |||phosphatidate cytidylyltransferase|Schizosaccharo...    25   9.5  

>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 899

 Score = 48.8 bits (111), Expect = 7e-07
 Identities = 20/43 (46%), Positives = 35/43 (81%)
 Frame = +3

Query: 513 AKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 641
           A ++VPGD+V + +GD++PAD+R+++  +T + ID+S LTGE+
Sbjct: 133 ASKLVPGDLVILQIGDRVPADLRIVE--ATELEIDESNLTGEN 173


>SPBC839.06 |cta3||P-type ATPase, calcium transporting
           Cta3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1037

 Score = 47.2 bits (107), Expect = 2e-06
 Identities = 21/44 (47%), Positives = 32/44 (72%)
 Frame = +3

Query: 522 IVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVI 653
           +VPGDVV +  GD +PAD+RL++  +     D+++LTGES+ VI
Sbjct: 139 LVPGDVVVLKTGDVVPADLRLVE--TVNFETDEALLTGESLPVI 180



 Score = 31.5 bits (68), Expect = 0.11
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +2

Query: 116 VEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVL 253
           +++V   F T    GL+ ++ +    +YG N L  + G S W+++L
Sbjct: 15  IKDVESEFLTSIPNGLTHEEAQNRLSEYGENRLEADSGVSAWKVLL 60


>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1010

 Score = 43.2 bits (97), Expect = 3e-05
 Identities = 22/46 (47%), Positives = 31/46 (67%)
 Frame = +3

Query: 513 AKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
           A EIVPGD++ +  G   PAD RLI      +++DQS +TGES++V
Sbjct: 279 ASEIVPGDILHLDEGTICPADGRLI-TKDCFLQVDQSAITGESLAV 323



 Score = 30.7 bits (66), Expect = 0.19
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +2

Query: 119 EEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSI 238
           EE+L+   TDP  GL+  +++  ++KYG N++  E+  +I
Sbjct: 163 EELLE---TDPKYGLTESEVEERKKKYGLNQMKEEKTNNI 199


>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 919

 Score = 39.5 bits (88), Expect = 4e-04
 Identities = 19/46 (41%), Positives = 32/46 (69%)
 Frame = +3

Query: 513 AKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
           A E+VPGD++++  G  I AD R++      +++DQS +TGES++V
Sbjct: 191 ANEVVPGDILKLDEGTIICADGRVV-TPDVHLQVDQSAITGESLAV 235



 Score = 32.7 bits (71), Expect = 0.048
 Identities = 22/60 (36%), Positives = 32/60 (53%)
 Frame = +1

Query: 367 VILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKTVPRKLFPGTLLK 546
           VI  +L+ NAVVG  QE  A S ++ LK+       VIR  +  V +    ++ PG +LK
Sbjct: 144 VICALLMLNAVVGFVQEYQAGSIVDELKKSLALKAVVIR--EGQVHELEANEVVPGDILK 201


>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1292

 Score = 34.3 bits (75), Expect = 0.016
 Identities = 17/44 (38%), Positives = 29/44 (65%)
 Frame = +3

Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
           ++V GDV+ V  GD +P D  LI+  S  + +D+S +TGE+ ++
Sbjct: 331 DLVVGDVLFVEAGDVVPVDGVLIE--SNNLVLDESAMTGETDNI 372


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 32.3 bits (70), Expect = 0.063
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = -1

Query: 488 SPLMTLPISGSYSFKASMADSAFLSCHTPTTALAIRISKITK-GSTKAENASSCSSNKAN 312
           S + + P+S + S  A+ A S  LS    TTA +   + ++   ST A +ASS      N
Sbjct: 418 SSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVN 477

Query: 311 TNEIIAANSKILTKRSS 261
           +    +A+S  LT  +S
Sbjct: 478 STTATSASSTPLTSVNS 494


>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1315

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +3

Query: 483 RRQIWSTKNRAKEIVPGDVVEVSVGDK--IPADIRLIKIYSTTIRIDQSILTGESVSV 650
           R   W T   + ++V GDV E+S  +    PAD  L+   S    +++S+LTGES+ V
Sbjct: 393 RDGFW-TSISSTDLVIGDVFEISDPELTIFPADALLL---SGDCIVNESMLTGESIPV 446


>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1402

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 516 KEIVPGDVVEVSVGDKIPADIRLI 587
           K++  GD V+V   D+IPADI +I
Sbjct: 295 KDVRVGDFVKVMDNDEIPADIVII 318


>SPAC6C3.06c |||P-type ATPase, calcium
           transporting|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1033

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +3

Query: 513 AKEIVPGDVVEVSVGDKIPADIRLIKI---YSTTIRIDQSILTGES 641
           A+ I  GDVV ++   +IPAD+ L++        IR DQ  L GE+
Sbjct: 184 AQNIQAGDVVYIAKDQRIPADMILLETTVGNEAFIRTDQ--LDGET 227


>SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor
           complex subunit Spp27|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 233

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 149 PDKGLSPDQIKRNQEKYGPNELPTEEGKSI 238
           PD  L   Q K N+E   PN+LP +E K +
Sbjct: 195 PDDQLPKPQPK-NEEPAAPNDLPKQEEKEL 223


>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 642

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -1

Query: 374 KITKGSTKAENASSCSSNKANTNEIIAANSKILTKRSSNCP 252
           ++    ++AEN    SS K+N+ E  A   K+  +R +  P
Sbjct: 85  ELESAESEAENDEESSSQKSNSKESHAQRKKLQKERKAMKP 125


>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1367

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 516 KEIVPGDVVEVSVGDKIPADIRLI 587
           K ++ GD+V+V   + IPAD+ ++
Sbjct: 325 KSLLVGDIVKVLADEAIPADLLIL 348


>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1096

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = +3

Query: 513 AKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 644
           A ++V GD++  S  D     +  I ++S++  +D+S++TGESV
Sbjct: 271 ADDLVIGDLLYFSNLDLKTCPVDGI-LFSSSCLLDESMVTGESV 313


>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 777

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 313 LALFEEHEDAFSAFVEPFVILLILI--ANAVVGVWQERNAESAIEALKEYE 459
           +A  + HED   A    F   L++   A+AVV VW++   E   +  +E E
Sbjct: 584 VATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEELE 634


>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1183

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 16/78 (20%), Positives = 33/78 (42%)
 Frame = +3

Query: 396  CSRSMAGKKRRICHRSFKRIRT*NG*SHKRRQIWSTKNRAKEIVPGDVVEVSVGDKIPAD 575
            C+   A  KR+ C  ++ R +     ++ R+QI     R    V  +  ++ +       
Sbjct: 978  CAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQLKPPTSVQ 1037

Query: 576  IRLIKIYSTTIRIDQSIL 629
            I+ ++ +  +  IDQ  L
Sbjct: 1038 IKALRQFIASAYIDQVAL 1055


>SPCC1235.05c |fft2||fun thirty related protein
            Fft2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1284

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 51   GKIVQTDGNIVIPPWRTLTRNPWKK--S*NILAQTQTKALVQTK*KGTK 191
            G+ VQTD N  +P  ++ T  P +   S ++   T+   +V T  K TK
Sbjct: 1178 GENVQTDSNAAVPSSKSSTEEPNESVLSGHLDLDTEASPVVSTIEKTTK 1226


>SPBC13A2.03 |||phosphatidate
           cytidylyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 439

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -2

Query: 211 FIGSIFFLVPF-YLVWTKAFVWVCAKIF 131
           F G  +F VP  Y+V    F ++C K+F
Sbjct: 202 FEGLFWFFVPVCYVVCNDVFAYLCGKMF 229


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,468,486
Number of Sequences: 5004
Number of extensions: 47493
Number of successful extensions: 180
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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