Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0890.Seq
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,960... 83 1e-16
05_01_0154 + 1020650-1022050,1022304-1022373,1022496-1022617,102... 79 4e-15
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 71 1e-12
07_01_0659 + 4946937-4946990,4947579-4947698,4947820-4947918,494... 51 7e-07
05_03_0497 - 14715267-14715548,14715648-14715830,14715911-147166... 50 1e-06
03_05_0742 + 27310404-27310457,27311281-27311286,27311350-273114... 50 1e-06
03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,688... 50 2e-06
08_01_0877 - 8607790-8608083,8608174-8608356,8608495-8608665,860... 49 3e-06
06_01_0571 - 4038319-4040877,4040962-4041012 49 3e-06
03_01_0594 - 4385291-4385503,4385647-4385829,4385944-4386117,438... 49 3e-06
04_04_1427 + 33491847-33491888,33493504-33493623,33493740-334939... 49 4e-06
02_05_1079 + 33950290-33950337,33950418-33952586,33952690-339527... 48 7e-06
12_02_0932 + 24519204-24519380,24520074-24520128,24520251-245222... 42 3e-04
03_05_0325 + 23135816-23135894,23136161-23136333,23136440-231366... 42 4e-04
02_01_0570 - 4195409-4195443,4196245-4196333,4196539-4196630,419... 42 6e-04
08_02_1257 - 25646029-25646054,25646139-25646236,25646609-256467... 41 7e-04
12_01_0237 + 1782593-1782778,1784942-1784996,1785086-1787028,178... 40 0.001
11_01_0240 + 1852186-1852371,1854183-1854237,1854391-1856267,185... 40 0.001
01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171... 40 0.001
04_04_1073 - 30606472-30606515,30606897-30606988,30607152-306072... 40 0.002
03_02_0069 + 5401789-5401965,5403514-5403568,5403674-5405649,540... 38 0.007
02_01_0541 - 3950336-3950353,3950660-3951061,3951174-3951431,395... 37 0.016
05_05_0338 + 24204301-24206262,24206337-24206495,24206864-242070... 36 0.028
06_03_1047 - 27133869-27134345,27134444-27134701,27134841-271350... 34 0.086
10_08_0019 - 14167952-14171059 33 0.15
03_01_0047 + 391689-392738,392832-392999,393091-393195,393529-39... 31 0.61
11_04_0351 + 16666398-16666532,16666911-16667048,16667398-166683... 31 0.80
08_02_1063 + 24024030-24024506,24024803-24024856,24024965-240251... 30 1.4
09_06_0308 - 22199389-22199451,22199604-22199924,22200178-222004... 29 3.2
07_03_1525 + 27448257-27448582,27450741-27450973,27451280-274529... 29 4.3
07_03_1523 + 27432991-27433199,27433585-27434185,27434468-274346... 29 4.3
02_05_0340 + 28105222-28105960,28106844-28106987,28107083-281072... 28 5.6
11_04_0443 - 17808897-17809110,17809169-17813652 28 7.5
07_03_1292 - 25558643-25559376,25559989-25560097,25560578-255606... 28 7.5
07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171,744... 28 7.5
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225 28 7.5
02_01_0722 + 5405550-5405810,5406654-5407399,5407575-5408046,540... 28 7.5
11_06_0442 - 23622633-23623000,23623149-23623721,23624795-236253... 27 9.9
>03_02_0579 -
9606317-9606892,9607571-9607799,9607902-9608011,
9608898-9609275,9609380-9609658,9610044-9610168,
9610269-9610335,9610582-9612006
Length = 1062
Score = 83.4 bits (197), Expect = 1e-16
Identities = 52/102 (50%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Frame = +1
Query: 250 LGQFDDLLVKXXXXXXXXSFVLALF---EEHEDAFSAFVEPFVILLILIANAVVGVWQER 420
L QFDD LV+ SFVLAL+ E E +AFVEP VI LILI NAVVGVWQE
Sbjct: 79 LEQFDDTLVRILLAAAVVSFVLALYDGAEGGEVGATAFVEPLVIFLILIVNAVVGVWQES 138
Query: 421 NAESAIEALKEYEPEMGKVIRGDKSGVQKTVPRKLFPGTLLK 546
NAE A+EALKE + E V R D R L PG +++
Sbjct: 139 NAEKALEALKEIQSEHATVKR-DGRWSHGLPARDLVPGDIVE 179
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/57 (50%), Positives = 45/57 (78%)
Frame = +3
Query: 480 KRRQIWSTKNRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
KR WS A+++VPGD+VE+ VGDK+PAD+R++++ S+T+R++Q LTGE+ SV
Sbjct: 158 KRDGRWSHGLPARDLVPGDIVELRVGDKVPADMRVLQLISSTLRVEQGSLTGETASV 214
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 101 AHTKSVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLD 256
A ++ E L G D+GLS ++ +YGPNEL S+W+LVL+
Sbjct: 29 AWARTPSECLAELGVAADRGLSSEEAAARLRRYGPNELERHAAPSVWKLVLE 80
>05_01_0154 +
1020650-1022050,1022304-1022373,1022496-1022617,
1022753-1023031,1023402-1023779,1024079-1024188,
1024394-1024622,1024725-1025303
Length = 1055
Score = 78.6 bits (185), Expect = 4e-15
Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 QFDDLLVKXXXXXXXXSFVLALFEEHEDA-FSAFVEPFVILLILIANAVVGVWQERNAES 432
QFDD LV+ SF LAL SAFVEP VI LIL+ NA VGVWQE NAE
Sbjct: 75 QFDDTLVRILLAAAAVSFALALSSSAGAVTLSAFVEPLVIFLILVVNAAVGVWQETNAEK 134
Query: 433 AIEALKEYEPEMGKVIRGDKSGVQKTVPRKLFPGTLLK 546
A+EAL+E + + V+R D + R L PG +++
Sbjct: 135 ALEALREIQSDHAAVLR-DGDWLPSLPARDLVPGDIVQ 171
Score = 64.1 bits (149), Expect = 9e-11
Identities = 24/52 (46%), Positives = 42/52 (80%)
Frame = +3
Query: 495 WSTKNRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
W A+++VPGD+V++ VGDK+PAD+R++++ ++T+R++Q LTGE+ SV
Sbjct: 155 WLPSLPARDLVPGDIVQLRVGDKVPADMRVLRLVTSTLRVEQGSLTGETASV 206
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 101 AHTKSVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLV 250
A + VEE G +GLS + +GPNEL G ++ QLV
Sbjct: 23 AWARGVEECEARLGVSASRGLSSREAAARLRAHGPNELAEHPGPTLLQLV 72
>03_05_1014 -
29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 70.5 bits (165), Expect = 1e-12
Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +1
Query: 250 LGQFDDLLVKXXXXXXXXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAE 429
L QFDDLLVK SF+LA E +AF+EP VI LIL ANA VGV E NAE
Sbjct: 88 LKQFDDLLVKILIAAAVISFLLARMNG-ETGLAAFLEPSVIFLILAANAAVGVITETNAE 146
Query: 430 SAIEALKEYEPEMGKVIRGDKSGVQKTVP-RKLFPGTLLK 546
A+E L+ Y+ ++ V+R +G +P +L PG +++
Sbjct: 147 KALEELRAYQADVATVLR---NGCFSILPATELVPGDIVE 183
Score = 64.1 bits (149), Expect = 9e-11
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +3
Query: 513 AKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
A E+VPGD+VEV VG K+PAD+R I++ S +R+DQ+ILTGES SV
Sbjct: 173 ATELVPGDIVEVGVGCKVPADMRTIEMLSHQLRVDQAILTGESCSV 218
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 92 MEDAHTKSVEEVLKYFGTDPDKGLSPDQI 178
MEDA+ KSV EVL FG DP KGLS +Q+
Sbjct: 1 MEDAYAKSVAEVLAAFGVDPTKGLSDEQV 29
>07_01_0659 +
4946937-4946990,4947579-4947698,4947820-4947918,
4948038-4948175,4948268-4948402,4948501-4948609,
4948735-4948976,4949061-4949180,4949272-4949391,
4949477-4949599,4949708-4949812,4949896-4950040,
4950337-4950501,4950621-4950859,4950939-4950971,
4951082-4951163,4951314-4951474,4951566-4951751,
4951877-4952059,4952166-4952347,4952461-4952557
Length = 945
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 495 WSTKNRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
WS + A +VPGD++ V +GD IPAD RL++ ++IDQS LTGES+ V
Sbjct: 144 WS-EEEAAILVPGDIISVKLGDIIPADARLLE--GDPLKIDQSALTGESLPV 192
>05_03_0497 -
14715267-14715548,14715648-14715830,14715911-14716668,
14716762-14717167,14717274-14717399,14717506-14717625,
14717675-14718463,14718554-14718709,14718800-14718898,
14718989-14719108,14719165-14719251
Length = 1041
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +3
Query: 495 WSTKNRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
WS ++ A +VPGD++ + +GD IPAD RL++ ++IDQS LTGES+ V
Sbjct: 161 WSEQDAAI-LVPGDIISIKLGDIIPADARLME--GDPLKIDQSALTGESLPV 209
>03_05_0742 +
27310404-27310457,27311281-27311286,27311350-27311469,
27311597-27311695,27311787-27311795,27311843-27311980,
27312084-27312218,27312308-27312517,27312592-27312798,
27312891-27313010,27313079-27313198,27313279-27313401,
27313501-27313605,27313764-27313908,27314658-27315148,
27315236-27315268,27315556-27315637,27315747-27315907,
27316021-27316206,27316294-27316476,27316573-27316751,
27317009-27317105
Length = 1000
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +3
Query: 483 RRQIWSTKNRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 644
R W T+ A +VPGD++ + +GD IPAD RL++ ++IDQS LTGES+
Sbjct: 145 RNGSW-TEEEAAILVPGDIISIKLGDIIPADARLLE--GDPLKIDQSALTGESL 195
>03_01_0006 +
65675-65808,66385-66457,68290-68526,68648-68785,
68871-69005,69131-69310,69495-69701,69821-69943,
70240-70359,70758-70880,72067-72171,72254-72398,
73443-73607,73669-73907,74452-74484,74977-75058,
75200-75360,75739-75951,76789-76971,77051-77220,
77375-77474
Length = 1021
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +3
Query: 513 AKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
A +VPGD++ V +GD IPAD RL++ ++IDQS LTGES+ V
Sbjct: 206 ASLLVPGDIISVKLGDIIPADARLLE--GDPLKIDQSALTGESLPV 249
>08_01_0877 -
8607790-8608083,8608174-8608356,8608495-8608665,
8608765-8608925,8609012-8609093,8609197-8609229,
8609359-8609597,8609686-8609850,8609955-8610204,
8610314-8611414,8611841-8611960,8612626-8612691
Length = 954
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +3
Query: 495 WSTKNRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
WS + A +VPGDV+ V +GD +PAD RL+ ++IDQS LTGES+ V
Sbjct: 148 WSETD-AFVLVPGDVINVKLGDIVPADARLLD--GDPLKIDQSALTGESLPV 196
>06_01_0571 - 4038319-4040877,4040962-4041012
Length = 869
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +3
Query: 504 KNRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
+ A +VPGD++ + +GD IPAD RL++ ++IDQS LTGES+ V
Sbjct: 145 EQEAAILVPGDIISIKLGDIIPADARLLE--GDPLKIDQSALTGESLPV 191
>03_01_0594 -
4385291-4385503,4385647-4385829,4385944-4386117,
4386213-4386373,4386470-4386551,4386626-4386658,
4386755-4387161,4387237-4387381,4387483-4387587,
4387704-4387826,4387908-4388027,4388118-4388237,
4388569-4388775,4388857-4389036,4389151-4389285,
4389382-4389519,4389630-4389728,4389832-4389951,
4390029-4390091
Length = 935
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +3
Query: 513 AKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
A +VPGD++ + +GD +PAD RL++ ++IDQS LTGES+ V
Sbjct: 152 ASTLVPGDIISIRLGDIVPADARLLE--GDPLKIDQSALTGESLPV 195
>04_04_1427 +
33491847-33491888,33493504-33493623,33493740-33493976,
33494754-33495638,33495733-33495837,33495920-33496064,
33496146-33496310,33496391-33496629,33496724-33496756,
33496840-33496921,33497017-33497177,33497282-33497455,
33497549-33497731,33497832-33498019,33498155-33498251
Length = 951
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3
Query: 504 KNRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
+ A +VPGD++ + +GD +PAD RL++ ++IDQS LTGES+ V
Sbjct: 142 EQEAAILVPGDIISIKLGDIVPADARLLE--GDPLKIDQSALTGESLPV 188
>02_05_1079 +
33950290-33950337,33950418-33952586,33952690-33952780,
33952955-33953435,33954249-33954345
Length = 961
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +3
Query: 495 WSTKNRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
W ++ A +VPGD++ + +GD IPAD RL++ +++DQ+ LTGES+ V
Sbjct: 142 WQEQD-ASILVPGDIISIKLGDIIPADARLLE--GDPLKVDQAALTGESMPV 190
>12_02_0932 +
24519204-24519380,24520074-24520128,24520251-24522202,
24522288-24522446,24522878-24523049,24523131-24523429,
24524037-24524285
Length = 1020
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/45 (44%), Positives = 33/45 (73%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVI 653
+++PGDVV +++GD++PAD I +S + I++S LTGES V+
Sbjct: 255 DLLPGDVVHLAIGDQVPADGLFISGFS--LLINESSLTGESEPVV 297
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 143 TDPDKGLSP--DQIKRNQEKYGPNELPTEEGKSIWQLV 250
T P GLS + IKR Q+ YG N+ E +S W V
Sbjct: 130 TSPADGLSTAEESIKRRQDVYGLNKFTESEVRSFWVFV 167
>03_05_0325 +
23135816-23135894,23136161-23136333,23136440-23136613,
23136881-23137004,23137090-23137190,23137337-23137423,
23137801-23137896,23138209-23138329,23138475-23138603,
23139458-23139549,23139660-23139771,23140189-23140541,
23140670-23140899,23141179-23141278,23143357-23143411,
23143548-23145496,23145587-23145745,23146514-23146685,
23146758-23147056,23147246-23147521
Length = 1626
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
+++PGD V ++VGD++PAD I +S + +D+S LTGES V
Sbjct: 853 DLLPGDAVHLAVGDQVPADGLFISGFS--VLVDESSLTGESEPV 894
>02_01_0570 -
4195409-4195443,4196245-4196333,4196539-4196630,
4196726-4196833,4196984-4197118,4197211-4197256,
4197358-4197458,4198285-4198422,4198503-4198601,
4198740-4198856,4199195-4199356,4199734-4199793,
4200371-4200538,4200608-4200718,4201401-4201499,
4201579-4201644,4202407-4202490,4202563-4202605,
4202684-4202739,4202817-4202925,4203442-4203524,
4203842-4203925,4204311-4204382,4204462-4204539,
4204633-4204716,4204806-4204876,4205943-4206012,
4206495-4206626,4207168-4207284,4208185-4208367
Length = 963
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVI 653
+IV GDVV + +GD++PAD L+ +S + ID+S +TGES V+
Sbjct: 205 DIVVGDVVALKIGDQVPADGVLVSGHS--LAIDESSMTGESKIVV 247
>08_02_1257 -
25646029-25646054,25646139-25646236,25646609-25646700,
25646786-25646893,25647212-25647346,25647648-25647752,
25647951-25648088,25648865-25648963,25649079-25649195,
25649446-25649610,25649955-25650014,25650395-25650559,
25650636-25650746,25651220-25651333,25651466-25651531,
25651857-25651994,25652303-25652386,25652468-25652510,
25652621-25652676,25652772-25652880,25652944-25653026,
25653127-25653210,25653383-25653454,25653557-25653634,
25653717-25653800,25653892-25653962,25654095-25654164,
25654314-25654403,25654500-25654661,25654702-25654817,
25654946-25654988,25655069-25655185,25655897-25656046
Length = 1082
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
++V GDVV + +GD++PAD LI +S + ID+S +TGES +V
Sbjct: 287 DLVVGDVVPLKIGDQVPADGVLISGHS--LAIDESSMTGESKTV 328
>12_01_0237 +
1782593-1782778,1784942-1784996,1785086-1787028,
1787103-1787261,1787432-1787603,1787705-1788003,
1788278-1788583
Length = 1039
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 641
++V GD+V +S+GD++PAD I YS + ID+S L+GES
Sbjct: 255 DLVVGDIVHLSIGDQVPADGLYIHGYS--LLIDESSLSGES 293
>11_01_0240 +
1852186-1852371,1854183-1854237,1854391-1856267,
1856342-1856500,1856692-1856863,1856965-1857263,
1857539-1857844
Length = 1017
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 641
++V GD+V +S+GD++PAD I YS + ID+S L+GES
Sbjct: 233 DLVVGDIVHLSIGDQVPADGLYIHGYS--LLIDESSLSGES 271
>01_07_0124 +
41212728-41212922,41215156-41215210,41215336-41217128,
41217363-41217521,41217883-41218054,41218173-41218471,
41219060-41219368
Length = 993
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
+IV GD+V +S+GD++PAD I YS +D+S L+GES V
Sbjct: 258 DIVVGDIVHLSIGDQVPADGLFIDGYSFV--VDESNLSGESEPV 299
>04_04_1073 -
30606472-30606515,30606897-30606988,30607152-30607243,
30607362-30607469,30607614-30607748,30607826-30607871,
30608320-30608420,30608512-30608649,30608721-30608819,
30608920-30609036,30609941-30610102,30610271-30610330,
30611120-30611216,30611238-30611296,30611364-30611480,
30611922-30612020,30612115-30612180,30612405-30612542,
30612659-30612742,30612820-30612892,30612937-30612992,
30613074-30613182,30613253-30613335,30613406-30613489,
30613679-30613750,30613827-30613904,30613984-30614067,
30614142-30614212,30614497-30614566,30614866-30614955,
30615046-30615177,30615250-30615350,30615634-30615691,
30615762-30615878,30617981-30618133
Length = 1094
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 641
++V GDVV + +GD++PAD LI +S + +D+S +TGES
Sbjct: 278 DLVAGDVVPLKIGDQVPADGILISGHS--LSVDESSMTGES 316
>03_02_0069 +
5401789-5401965,5403514-5403568,5403674-5405649,
5405710-5405868,5406081-5406252,5406617-5406915,
5407147-5407392
Length = 1027
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
+++ GD+V +S+GD++PAD + +S + I++S LTGES V
Sbjct: 255 DLLAGDIVHLSIGDQVPADGLFLSGFS--LLINESSLTGESEPV 296
>02_01_0541 -
3950336-3950353,3950660-3951061,3951174-3951431,
3951554-3951754,3951861-3952203,3952286-3952344,
3952757-3953082,3953283-3953745,3954180-3954794,
3955600-3955896
Length = 993
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +3
Query: 513 AKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
A I PGDV++V G K+PAD + ++ T+ +D+S++TGES +
Sbjct: 470 ASLIQPGDVLKVLPGSKVPADGTV--VWGTS-HVDESMVTGESAPI 512
>05_05_0338 +
24204301-24206262,24206337-24206495,24206864-24207035,
24207544-24207842,24208301-24208355,24208438-24208487,
24208522-24208827
Length = 1000
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
++V GD++ +S+GD +PAD I + ID+S L+GES V
Sbjct: 184 DLVVGDILHLSIGDVVPADGLFIS--GDCLMIDESSLSGESEPV 225
>06_03_1047 -
27133869-27134345,27134444-27134701,27134841-27135041,
27135242-27135584,27135674-27135732,27136256-27136581,
27136753-27136849,27137072-27137182,27137691-27138305,
27139578-27139880
Length = 929
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/43 (34%), Positives = 30/43 (69%)
Frame = +3
Query: 522 IVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
+ PGD+++V G K+PAD + ++ T+ +++S++TGES +
Sbjct: 390 VQPGDILKVLPGSKVPAD--GVVVWGTS-HVNESMITGESAPI 429
>10_08_0019 - 14167952-14171059
Length = 1035
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 519 EIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 638
++V GDVV + +GD +PAD + + +++D+S +TGE
Sbjct: 251 DVVVGDVVVLKIGDVVPAD--GVFLDGHALQVDESSMTGE 288
>03_01_0047 +
391689-392738,392832-392999,393091-393195,393529-393611,
393899-394364
Length = 623
Score = 31.5 bits (68), Expect = 0.61
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 513 AKEIVPGDVVEVSVGDKIPADIRLIK 590
A +VPGD++ + VGD +PA+ R+++
Sbjct: 107 AVNLVPGDIIFLKVGDIVPANARVLR 132
>11_04_0351 +
16666398-16666532,16666911-16667048,16667398-16668306,
16668383-16668511,16668774-16668996,16669085-16669231,
16669332-16669573,16669660-16669689,16669784-16669865,
16669968-16670128,16670775-16670898,16671206-16671414
Length = 842
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +3
Query: 483 RRQIWSTKNRAKEIVPGDVVEVSVGDKIPAD---IRLIKIYSTTIRIDQSI 626
R IW ++ A +VPGD++ + GD +PA+ + + +I + TIR ++ +
Sbjct: 144 RDGIWKHEDAAN-LVPGDIIYLKCGDIVPANACVLNMAQIDTKTIRHERHV 193
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 113 SVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPN 208
+ E+V+ GTD GL+ ++ R + YGPN
Sbjct: 7 AAEDVVARLGTDEATGLTGEEAARLLKLYGPN 38
>08_02_1063 +
24024030-24024506,24024803-24024856,24024965-24025118,
24025314-24025388,24025511-24025788,24026023-24026253,
24026522-24026620,24026740-24026889,24027830-24027976,
24028525-24028575,24028647-24028819,24029018-24029147,
24029361-24029458,24029655-24029892,24030634-24030837,
24031003-24031083,24031296-24031535
Length = 959
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +3
Query: 531 GDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
GD + V GD++PAD ++K +T +D+S LTGE + V
Sbjct: 415 GDYIVVLPGDRVPAD-GVVKSGRST--VDESSLTGEPMPV 451
>09_06_0308 -
22199389-22199451,22199604-22199924,22200178-22200423,
22202152-22203337,22203487-22203551,22204205-22204486,
22205005-22205106,22205587-22206105
Length = 927
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 552 RTLQQRPREQFPWHGFLYSRFVSSYDF 472
R ++ R R P +GFLY R +S+Y F
Sbjct: 545 RVVESRTRRWPPDYGFLYKRLLSTYTF 571
>07_03_1525 +
27448257-27448582,27450741-27450973,27451280-27452919,
27453129-27453575
Length = 881
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -1
Query: 494 DLSPLMTLPISGSYSFKASMADSAFLSCHTPTTALAIRISKI 369
D ++ L S + ++ + D+ F+ C+TP +ALA R ++
Sbjct: 827 DALSIVELTPSRAENYMVFLGDTGFMECNTPLSALADRAKEL 868
>07_03_1523 + 27432991-27433199,27433585-27434185,27434468-27434642,
27434686-27436418,27436871-27437317
Length = 1054
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -1
Query: 494 DLSPLMTLPISGSYSFKASMADSAFLSCHTPTTALAIRISKI 369
D ++ L S + ++ + D+ F+ C+TP +ALA R ++
Sbjct: 1000 DALSIVELTPSRAENYMVFLGDTGFMECNTPLSALADRAKEL 1041
>02_05_0340 +
28105222-28105960,28106844-28106987,28107083-28107235,
28107418-28107533,28107819-28107986,28108792-28109016,
28110445-28110483,28110497-28110592
Length = 559
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +2
Query: 89 TMEDAHTKSVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLDNSTT 268
++ + ++E+ K TD ++ D++K KYG TE + +DNS T
Sbjct: 389 SLSEEEIAGLKEMFKAMDTDNSGAITYDELKEGMRKYGSTLKDTEIRDLMEAADVDNSGT 448
>11_04_0443 - 17808897-17809110,17809169-17813652
Length = 1565
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
Frame = +3
Query: 51 GKIVQTDGNIVIP----PW-RTLTRNPWK 122
GK+V+T NIV+P W R + NPWK
Sbjct: 568 GKVVKTKTNIVVPAKGSKWVRLMGTNPWK 596
>07_03_1292 -
25558643-25559376,25559989-25560097,25560578-25560676,
25560797-25560893,25560973-25561027,25561072-25561187,
25561445-25561562,25562369-25562684
Length = 547
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 403 GVWQERNAESAIEALKEYEPEMGKVIRGDKS 495
G E +ES EA +E EPE V RG+ S
Sbjct: 66 GAGSEEESESESEAEREREPEQSGVDRGEAS 96
>07_01_0890 -
7437901-7439339,7439452-7439657,7439841-7440171,
7440268-7440405,7440619-7440874,7440963-7441318,
7441421-7441709
Length = 1004
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 516 KEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 650
+++ GDVV V G+ +P D ++ S +D+ LTGES V
Sbjct: 243 RDVRVGDVVAVRAGEIVPVDGVVVDGQS---EVDERSLTGESFPV 284
>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
Length = 554
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 106 HEIRGRSLKIFWHRPRQRP*SRPNKKEPR 192
HE+ G S ++ HR +P SRP K+ PR
Sbjct: 91 HEMPGLSRELIEHRLPIKPGSRPYKQPPR 119
>02_01_0722 +
5405550-5405810,5406654-5407399,5407575-5408046,
5408129-5408296,5408301-5408418,5408845-5409056,
5409165-5409287,5409395-5409880,5409976-5410401
Length = 1003
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +3
Query: 534 DVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 641
DV+++ G+K+P D +IK S +++S++TGE+
Sbjct: 451 DVIKIVPGEKVPVDGVVIKGQS---HVNESMITGEA 483
>11_06_0442 -
23622633-23623000,23623149-23623721,23624795-23625335,
23625807-23625982,23626081-23626804
Length = 793
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 492 IWSTKNRAKEIVPGDVVEVSVGDKIPADI 578
+W +N+ + I+P + +S G KIP +
Sbjct: 277 LWLDRNKLQGIIPSSITNLSEGLKIPTSL 305
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,888,103
Number of Sequences: 37544
Number of extensions: 307579
Number of successful extensions: 1024
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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