Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0887.Seq
(802 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC126.12 |||NGG1p interacting factor 3 family|Schizosaccharomy... 38 0.002
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch... 29 0.58
SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyce... 29 0.77
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 28 1.8
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 28 1.8
SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces... 28 1.8
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 27 2.3
SPAC17G6.06 |rps2401|rps24-1, rps24|40S ribosomal protein S24|Sc... 27 3.1
SPBC27.06c |mgr2||mitochondrial membrane protein Mgr1 |Schizosac... 26 7.2
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 25 9.5
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 25 9.5
>SPCC126.12 |||NGG1p interacting factor 3 family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 278
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -3
Query: 242 VQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIR 63
+ +V+ C G G S + + D + TGE+S + +A +G+ GH TERG ++
Sbjct: 189 ISKVSLCAGSGGSVVMNT---DADLYFTGELSHHQVLAAMAKGISVILCGHSNTERGYLK 245
>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 29.5 bits (63), Expect = 0.58
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 206 SFIDSAARFGVDAFITGEVSEQTIHSAREQG 114
S ++ A+FG + F TG+++E+ + ++QG
Sbjct: 275 STLEEIAKFGPEVFYTGKIAERLVKFVQQQG 305
>SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.1 bits (62), Expect = 0.77
Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 20 SHQDRYFHSATRSMREYHHVQWHGDLQHK---NAIPARGLNEWSVQKLRQ 160
S ++ Y+ +ATR + H +++H + K + + RG++EW +++ R+
Sbjct: 79 STEEDYYFNATRVL--IHRLKYHPTTKSKYPIHILALRGVDEWKIERFRK 126
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/61 (31%), Positives = 23/61 (37%)
Frame = -2
Query: 684 TLHHQELTTDLPSPKTQ*HSQDGNGSNVPARSNTQQSGSATQWDIPEG*GNRNNHQPECL 505
T +Q L D+PS K HS D S SN S+ D N N E +
Sbjct: 165 TKSNQRLGEDVPSKKKYPHSMDAEISKFKWDSNNNNDWSSLMKDCFRDVVNNNRKMKEII 224
Query: 504 K 502
K
Sbjct: 225 K 225
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +2
Query: 62 REYHHVQWHGD---LQHKNAIPARGLNEWSVQKLRQ 160
R Y H H D L N + A GLNE S+Q L++
Sbjct: 2254 RSYTHRARHADYAALSETNGVNAEGLNERSIQVLKR 2289
>SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 326
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -2
Query: 684 TLHHQELTTDLPSPKTQ*HSQDGNGSNVPARSNTQQSGSATQWDIPEG*GNRNNHQPECL 505
TLH ++TD PSP + + D N + ++ T + S+T G N + +C
Sbjct: 6 TLHSVSISTDFPSPNVESEAADVNEYSSTSKFETLGNQSSTNL----GFSNSLQDKWDCW 61
Query: 504 KKSL 493
K+ L
Sbjct: 62 KRDL 65
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 27.5 bits (58), Expect = 2.3
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +3
Query: 528 FDFLSLLEYPIALQNQTVEY--YFALERCCRYHPDYVTAFLAME--GPWLIPDDAKLHRK 695
FD + L P A Q+Q EY Y L H + A L E GPW DD ++ R
Sbjct: 430 FDAKAFLS-PEADQSQNCEYVLYGVLVHSGDLHNGHYYALLKTEKDGPWYKYDDTRVTRA 488
Query: 696 LLR 704
LR
Sbjct: 489 TLR 491
>SPAC17G6.06 |rps2401|rps24-1, rps24|40S ribosomal protein
S24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 134
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 663 LIPDDAKLHRKLLRWYSSVQTGMAELI-PVAQQW--QRKNQKAKMPGT 797
LI DD + +K Y V+ G AE I VA+Q QRKN+ K+ GT
Sbjct: 74 LIYDDVEAMKKFEPHYRLVRVGHAEPIQKVARQQRKQRKNRGKKVFGT 121
>SPBC27.06c |mgr2||mitochondrial membrane protein Mgr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 120
Score = 25.8 bits (54), Expect = 7.2
Identities = 24/81 (29%), Positives = 33/81 (40%)
Frame = -3
Query: 347 MFQVFNCCAGTGAGFLD*SASGT*AVMVWRYGPEVVQRVAWCTGGGQSFIDSAARFGVDA 168
M + AG G GFL G AV+ + GP R GQ + SAA FG
Sbjct: 14 MGAIMGSAAGLGIGFL----FGGVAVLRYGPGPRGFLRTL-----GQYMLTSAATFGFFM 64
Query: 167 FITGEVSEQTIHSAREQGLHF 105
I + + I ++ G H+
Sbjct: 65 SIGSVIRNEDIPLIQQSGSHW 85
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 150 NFASNKSIHAKTRGAI-DKTLP 212
NFASN++ H K GA+ TLP
Sbjct: 374 NFASNRNPHLKQGGAVPSSTLP 395
>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 357
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 321 RDWSWLPGLKRVWDVSRYGVAIRT 250
+D W +R WDVS+Y + I T
Sbjct: 331 KDEEWKGAKRRYWDVSKYFLPIVT 354
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,420,171
Number of Sequences: 5004
Number of extensions: 70692
Number of successful extensions: 207
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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