Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0887.Seq
         (802 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016021-1|AAV36906.1|  662|Drosophila melanogaster RE15373p pro...    29   7.4  
AY069556-1|AAL39701.2|  306|Drosophila melanogaster LD28566p pro...    29   7.4  
AE014298-2002|AAN09579.1|  662|Drosophila melanogaster CG11584-P...    29   7.4  
AE014134-2704|AAF53525.2|  292|Drosophila melanogaster CG4278-PA...    29   7.4  
AE014296-420|AAF47619.2| 1772|Drosophila melanogaster CG13809-PA...    29   9.8  

>BT016021-1|AAV36906.1|  662|Drosophila melanogaster RE15373p
           protein.
          Length = 662

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +1

Query: 148 ETSPVIKASTPKRAALSIKLCPPPVHQATRWTTSGPYRHTITAYVPDALQSRKPAPVP 321
           + +PVI+ S    A +SI   P PV Q  +      Y +      P  +Q   PAP P
Sbjct: 520 QQAPVIQQSYTAPAPVSI---PEPVQQIVQQPQYSGYSYQTPQQAPAPIQQSLPAPAP 574


>AY069556-1|AAL39701.2|  306|Drosophila melanogaster LD28566p
           protein.
          Length = 306

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
 Frame = -3

Query: 245 VVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGI 66
           ++Q V  C G G S +        D  ITGE+S   +              H  +ERG +
Sbjct: 200 LIQSVGICAGSGASLLKGIQ---ADLIITGEMSHHEVLEFTHNNTTVLLCNHSNSERGFL 256

Query: 65  R----ALSEWLNENTDLDVTFID 9
                 L++ LNE   + V+ +D
Sbjct: 257 HEFCPILAKSLNEECLVFVSEVD 279


>AE014298-2002|AAN09579.1|  662|Drosophila melanogaster CG11584-PB
           protein.
          Length = 662

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +1

Query: 148 ETSPVIKASTPKRAALSIKLCPPPVHQATRWTTSGPYRHTITAYVPDALQSRKPAPVP 321
           + +PVI+ S    A +SI   P PV Q  +      Y +      P  +Q   PAP P
Sbjct: 520 QQAPVIQQSYTAPAPVSI---PEPVQQIVQQPQYSGYSYQTPQQAPAPIQQSLPAPAP 574


>AE014134-2704|AAF53525.2|  292|Drosophila melanogaster CG4278-PA
           protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
 Frame = -3

Query: 245 VVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGI 66
           ++Q V  C G G S +        D  ITGE+S   +              H  +ERG +
Sbjct: 186 LIQSVGICAGSGASLLKGIQ---ADLIITGEMSHHEVLEFTHNNTTVLLCNHSNSERGFL 242

Query: 65  R----ALSEWLNENTDLDVTFID 9
                 L++ LNE   + V+ +D
Sbjct: 243 HEFCPILAKSLNEECLVFVSEVD 265


>AE014296-420|AAF47619.2| 1772|Drosophila melanogaster CG13809-PA
            protein.
          Length = 1772

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
 Frame = +3

Query: 516  AGDCFDFLSLLEYPIALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWLIPDDAKLHRK 695
            AGD    LS  E  +AL  +   Y  ALE      P  VTA     G WL+    +L   
Sbjct: 831  AGDIAHRLSRPEAALALYRKGGAYARALEIGRVVAPQEVTALEEEWGDWLV-SRKQLDAS 889

Query: 696  LLRWYSSVQTGMA-ELIPVAQQWQRKNQKAKM 788
            +  +  +  T  A E    A+QW++  Q AK+
Sbjct: 890  INHYIEAGATQKALEAAVGAKQWRKAVQIAKV 921


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,354,549
Number of Sequences: 53049
Number of extensions: 894466
Number of successful extensions: 3211
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3209
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)