Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0886.Seq
(800 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g73875.1 68414.m08555 endonuclease/exonuclease/phosphatase fa... 60 2e-09
At3g58560.1 68416.m06527 endonuclease/exonuclease/phosphatase fa... 56 4e-08
At1g31500.3 68414.m03859 endonuclease/exonuclease/phosphatase fa... 53 2e-07
At1g31500.2 68414.m03858 endonuclease/exonuclease/phosphatase fa... 53 2e-07
At1g31500.1 68414.m03857 endonuclease/exonuclease/phosphatase fa... 53 2e-07
At5g11350.1 68418.m01325 endonuclease/exonuclease/phosphatase fa... 53 3e-07
At3g58580.1 68416.m06529 endonuclease/exonuclease/phosphatase fa... 48 5e-06
At3g18500.1 68416.m02351 nocturnin-related contains weak similar... 39 0.004
At1g31530.1 68414.m03867 endonuclease/exonuclease/phosphatase fa... 39 0.004
At1g02270.1 68414.m00167 endonuclease/exonuclease/phosphatase fa... 33 0.22
At4g20720.1 68417.m03011 dentin sialophosphoprotein-related cont... 30 1.6
At1g05090.1 68414.m00512 dentin sialophosphoprotein-related cont... 30 1.6
At5g04750.1 68418.m00488 F1F0-ATPase inhibitor protein, putative... 29 2.7
At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family pr... 29 3.6
At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family pr... 29 3.6
At3g43300.1 68416.m04570 guanine nucleotide exchange family prot... 28 6.3
At5g58840.1 68418.m07373 subtilase family protein contains simil... 28 8.3
At5g15270.2 68418.m01789 KH domain-containing protein various pr... 28 8.3
At5g15270.1 68418.m01788 KH domain-containing protein various pr... 28 8.3
>At1g73875.1 68414.m08555 endonuclease/exonuclease/phosphatase
family protein contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 454
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 258 QEIRRLSPDILCLQEVQLSHLETFYSKFENIGYQGVFKQKTGDRQDGCAIYFKKSLFDLD 437
+EI R + ILCLQEV + +N G++GV K +TG+ DGCAI++K++LF+L
Sbjct: 139 KEISRYNASILCLQEVD--RFDDLDVLLKNRGFRGVHKSRTGEASDGCAIFWKENLFELL 196
Query: 438 DQISVEF 458
D +EF
Sbjct: 197 DHQHIEF 203
Score = 57.6 bits (133), Expect = 9e-09
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 12/241 (4%)
Frame = +1
Query: 46 SEHHRRPTKIPLNFRTW-ETVGKKTDSDETTFRFKVVSYNVLAQYLLEYHPYLYIDCSPR 222
S RR TK ++ E V + + + +VSYN+L H LY + +
Sbjct: 67 SLRRRRRTKEKISSSVEREWVFSANNFENLADKLVLVSYNLLGVDNASNHMDLYYNVPRK 126
Query: 223 NLKWKHRSRRLTKKFADCHLTYCASKKFNCRILKRSILNSKTSGTKG-SSNRKPETGRTD 399
+L+W R + K+ + + + ++ + R +L K G +G +R E
Sbjct: 127 HLEWSRRKHLICKEISRYNASILCLQEVD-RFDDLDVL-LKNRGFRGVHKSRTGEASDGC 184
Query: 400 ALFTSRSLYLIWTIKXXXXXXXXXXXXXXXXXXXXXXXXAEELPGSSI----------VV 549
A+F +L+ + + EE P S + VV
Sbjct: 185 AIFWKENLFEL--LDHQHIEFDKFGMRNNVAQLCVLEMNCEEDPKSKLRVRSSDPRRLVV 242
Query: 550 ATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESAVINL 729
H+L+NPKR D++L Q+++ L + + +E G+ PV + GD NSTP+SA+ +
Sbjct: 243 GNIHVLFNPKRGDIKLGQVRLFLEKA-----YKLSQEWGNIPVAIAGDLNSTPQSAIYDF 297
Query: 730 L 732
+
Sbjct: 298 I 298
>At3g58560.1 68416.m06527 endonuclease/exonuclease/phosphatase
family protein similar to SP|P31384 Glucose-repressible
alcohol dehydrogenase transcriptional effector (Carbon
catabolite repressor protein 4) {Saccharomyces
cerevisiae}; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 602
Score = 55.6 bits (128), Expect = 4e-08
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Frame = +3
Query: 246 QTSYQEIRRLSPDILCLQEVQLSHLETFY-SKFENIGYQGVFKQKTGD-------RQDGC 401
Q +EI + DI+CLQEVQ H E F+ + + GYQG+FK+KT + DGC
Sbjct: 281 QNLLREIVKYRADIVCLQEVQNDHFEEFFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGC 340
Query: 402 AIYFKKSLFDLDDQISVEF 458
A +F++ F + VEF
Sbjct: 341 ATFFRRDRFSHVKKYEVEF 359
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 517 AEELPGSS--IVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGRESGHFPVILTG 690
A + PG + VA TH+ + DV+L Q+ LL +++ A S P+++ G
Sbjct: 402 AADNPGKRQLLCVANTHVNVPHELKDVKLWQVHTLLKGLEKIA------ASADIPMLVCG 455
Query: 691 DFNSTPESAVINLLDRGRV 747
DFN+ P SA LL G+V
Sbjct: 456 DFNTVPASAPHTLLAVGKV 474
>At1g31500.3 68414.m03859 endonuclease/exonuclease/phosphatase
family protein low similarity to SP|P31384
Glucose-repressible alcohol dehydrogenase
transcriptional effector (Carbon catabolite repressor
protein 4) {Saccharomyces cerevisiae}; contains Pfam
profile PF03372: Endonuclease/Exonuclease/phosphatase
family
Length = 283
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = +3
Query: 264 IRRLSPDILCLQEVQLSHLETFY-SKFENIGYQGVFKQKTGDR-QDGCAIYFKKSLFDLD 437
++ L D CLQEV ++FY + +++GY G++ Q+TG R +DGCAI++K S +L
Sbjct: 97 LKNLQADFFCLQEVD--EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELV 154
Query: 438 DQISVEF 458
+ +E+
Sbjct: 155 TKERIEY 161
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +1
Query: 541 IVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESAV 720
++VA THL ++P+ DV+LAQ K LL+ + +F + ++L GDFNS P V
Sbjct: 224 VIVANTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMV 283
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 103 VGKKTDSDETTFRFKVVSYNVLAQYLLEYHPYLYIDCSPRNLKWKHRSRRL 255
+G + SD RF++VSYN+LAQ ++ L P LKWK RS +
Sbjct: 47 IGSRNKSDG--IRFRLVSYNILAQVYVK--SALLPHSPPACLKWKARSHAI 93
>At1g31500.2 68414.m03858 endonuclease/exonuclease/phosphatase
family protein low similarity to SP|P31384
Glucose-repressible alcohol dehydrogenase
transcriptional effector (Carbon catabolite repressor
protein 4) {Saccharomyces cerevisiae}; contains Pfam
profile PF03372: Endonuclease/Exonuclease/phosphatase
family
Length = 383
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = +3
Query: 264 IRRLSPDILCLQEVQLSHLETFY-SKFENIGYQGVFKQKTGDR-QDGCAIYFKKSLFDLD 437
++ L D CLQEV ++FY + +++GY G++ Q+TG R +DGCAI++K S +L
Sbjct: 97 LKNLQADFFCLQEVD--EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELV 154
Query: 438 DQISVEF 458
+ +E+
Sbjct: 155 TKERIEY 161
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/77 (37%), Positives = 42/77 (54%)
Frame = +1
Query: 541 IVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESAV 720
++VA THL ++P+ DV+LAQ K LL+ + +F + ++L GDFNS P V
Sbjct: 224 VIVANTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMV 283
Query: 721 INLLDRGRVRASSLETI 771
+ L G A ETI
Sbjct: 284 YSYLVSG--NAKPTETI 298
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 103 VGKKTDSDETTFRFKVVSYNVLAQYLLEYHPYLYIDCSPRNLKWKHRSRRL 255
+G + SD RF++VSYN+LAQ ++ L P LKWK RS +
Sbjct: 47 IGSRNKSDG--IRFRLVSYNILAQVYVK--SALLPHSPPACLKWKARSHAI 93
>At1g31500.1 68414.m03857 endonuclease/exonuclease/phosphatase
family protein low similarity to SP|P31384
Glucose-repressible alcohol dehydrogenase
transcriptional effector (Carbon catabolite repressor
protein 4) {Saccharomyces cerevisiae}; contains Pfam
profile PF03372: Endonuclease/Exonuclease/phosphatase
family
Length = 388
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = +3
Query: 264 IRRLSPDILCLQEVQLSHLETFY-SKFENIGYQGVFKQKTGDR-QDGCAIYFKKSLFDLD 437
++ L D CLQEV ++FY + +++GY G++ Q+TG R +DGCAI++K S +L
Sbjct: 102 LKNLQADFFCLQEVD--EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELV 159
Query: 438 DQISVEF 458
+ +E+
Sbjct: 160 TKERIEY 166
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/77 (37%), Positives = 42/77 (54%)
Frame = +1
Query: 541 IVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESAV 720
++VA THL ++P+ DV+LAQ K LL+ + +F + ++L GDFNS P V
Sbjct: 229 VIVANTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMV 288
Query: 721 INLLDRGRVRASSLETI 771
+ L G A ETI
Sbjct: 289 YSYLVSG--NAKPTETI 303
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 103 VGKKTDSDETTFRFKVVSYNVLAQYLLEYHPYLYIDCSPRNLKWKHRSRRL 255
+G + SD RF++VSYN+LAQ ++ L P LKWK RS +
Sbjct: 52 IGSRNKSDG--IRFRLVSYNILAQVYVK--SALLPHSPPACLKWKARSHAI 98
>At5g11350.1 68418.m01325 endonuclease/exonuclease/phosphatase
family protein contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 754
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +3
Query: 261 EIRRLSPDILCLQEVQLSHLETFYSKFENIGYQGVFKQKTGDRQDGCAIYFKKSLFDLDD 440
E+ S DI+CLQEV + + ++ GY ++K +TG+ DGCAI+++ + F L
Sbjct: 224 ELSLWSADIMCLQEVD--KFQDLEEEMKHRGYSAIWKMRTGNAVDGCAIFWRSNRFKLVH 281
Query: 441 QISVEFFQPELPILNRDNIGVI 506
+ S++F Q L RDN+ I
Sbjct: 282 EESIQFNQLGL----RDNVAQI 299
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +1
Query: 541 IVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESAV 720
+V+ H+L+NPKR D +L Q++ LL + + + P++L GDFN TP+S +
Sbjct: 327 VVICNIHVLFNPKRGDFKLGQVRTLLDKAHAVSKLWDDA-----PIVLCGDFNCTPKSPL 381
Query: 721 INLLDRGRVRASSLETIRIGNE 786
N + ++ S L ++ +
Sbjct: 382 YNFISDRKLDLSGLARDKVSGQ 403
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 58 RRPTKIPLNFRTWETVGKKTDSDETTFRFKVVSYNVLAQYLLEYH-PYLYIDCSPRN-LK 231
+RP P ++R WE KT + +F V+SYN+LA YL H LY PRN L
Sbjct: 157 QRPRSKPSDYREWEYA--KTPPSPGSEKFVVLSYNILADYLANDHWRSLYFHI-PRNMLS 213
Query: 232 WKHRSRRL 255
W R +L
Sbjct: 214 WGWRKSKL 221
>At3g58580.1 68416.m06529 endonuclease/exonuclease/phosphatase
family protein similar to SP|P31384 Glucose-repressible
alcohol dehydrogenase transcriptional effector (Carbon
catabolite repressor protein 4) {Saccharomyces
cerevisiae}; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 605
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Frame = +3
Query: 246 QTSYQEIRRLSPDILCLQEVQLSHL-ETFYSKFENIGYQGVFKQKTGD-------RQDGC 401
Q +EI D++CLQEVQ H E F + + GYQ ++K+KT + DGC
Sbjct: 284 QNLLREIVGYRADVVCLQEVQSDHFHEIFAPELDKHGYQALYKRKTNEVLSGSTSAIDGC 343
Query: 402 AIYFKKSLFDLDDQISVEF 458
A +F++ F + VEF
Sbjct: 344 ATFFRRDRFSHVKKYDVEF 362
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +1
Query: 541 IVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESAV 720
+V+A TH+ DV+L Q+ LL +++ A S P+++ GDFN+ P SA
Sbjct: 417 VVLANTHVNVQQDLKDVKLWQVHTLLKGLEKIA------ASADIPMLVCGDFNTLPGSAP 470
Query: 721 INLLDRGRV 747
LL G+V
Sbjct: 471 HTLLVMGKV 479
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 142 FKVVSYNVLAQYLLEYHPYLYIDCSPRNLKWKHRSRRLTKK 264
F V+SYN+L+ Y Y C P L W +R + L ++
Sbjct: 251 FTVLSYNILSDTSASSDLYSY--CPPWALSWPYRRQNLLRE 289
>At3g18500.1 68416.m02351 nocturnin-related contains weak similarity
to Nocturnin (CCR4 protein homolog) (Swiss-Prot:O35710)
[Mus musculus]
Length = 262
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 118 DSDETTF---RFKVVSYNVLAQYLLEYHPYLYIDCSPRNLKWKHRSRRLTKK 264
DSD T RF VVSYN+L YH LY + S LKW +R R + ++
Sbjct: 96 DSDTTPVSQERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEE 147
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 258 QEIRRLSPDILCLQEVQLSHLETFYSKFENIGYQGVFKQ 374
+E+ RL+PDI+ +QEV + + F S E GY G +K+
Sbjct: 146 EELIRLNPDIISMQEVD-KYFDLF-SMMEKAGYAGSYKK 182
>At1g31530.1 68414.m03867 endonuclease/exonuclease/phosphatase
family protein contains similarity to nocturnin [Homo
sapiens] GI:9885288; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 283
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +1
Query: 541 IVVATTHLLYN-PKR-TDVRLAQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTP 708
+++A++HL P R D++LAQ+K L+ E+ F + + VIL GDFNS P
Sbjct: 137 VIIASSHLKSGKPDRWDDLKLAQVKTLMTELASFKEIISALTNCSPSVILAGDFNSKP 194
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 264 IRRLSPDILCLQEVQLSHLETFYSKFENIGYQGV-FKQKTGDRQDGCAIYFK 416
I+ D +CLQEV H F E GY G+ + K G CAI+FK
Sbjct: 28 IKNFEADFICLQEVDEYH-SFFDRNMEAQGYSGIPIENKEGYE---CAIFFK 75
>At1g02270.1 68414.m00167 endonuclease/exonuclease/phosphatase
family protein / calcium-binding EF hand family protein
contains Pfam profiles: PF03372
endonuclease/exonuclease/phosphatase family, PF00036 EF
hand
Length = 484
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = +1
Query: 541 IVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESAV 720
+++ THLL+ P + + + ++ + ++ + + H P+IL GD+N + V
Sbjct: 211 VIIVNTHLLF-PHDSSLSIVRLHQVYKILEYLEAYQKENKLNHMPIILCGDWNGSKRGHV 269
Query: 721 INLL 732
L
Sbjct: 270 YKFL 273
>At4g20720.1 68417.m03011 dentin sialophosphoprotein-related
contains weak similarity to dentin sialophosphoprotein
precursor (Swiss-Prot:Q9NZW4) [Homo sapiens]
Length = 729
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 39 REIRAPQETNKDPTQLQDLGDCREEDRFGRDNV*VQSGVLQ 161
+E ++ N D + + D+G C+E+D FG + S +LQ
Sbjct: 564 KEQSVDEKQNTDTSVMSDIGKCQEDDLFGTWDSFTSSTILQ 604
>At1g05090.1 68414.m00512 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 706
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 39 REIRAPQETNKDPTQLQDLGDCREEDRFGRDNV*VQSGVLQ 161
+E ++ N D + + D+G C+E+D FG + S +LQ
Sbjct: 541 KEQSVDEKQNTDTSVMSDIGKCQEDDLFGTWDSFTSSTILQ 581
>At5g04750.1 68418.m00488 F1F0-ATPase inhibitor protein, putative
similar to F1F0-ATPase inhibitor protein [Oryza sativa
(japonica cultivar-group)] gi|5106371|dbj|BAA81661
Length = 94
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 322 KRSILNSKTSGTKGSSNRKPETGR 393
K+ + K G KGS+N+KPET +
Sbjct: 70 KKKLEQDKLDGEKGSANKKPETNK 93
>At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 442
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 563 KWVVATTMEDPGNSSATIYNHTDIITVEDRQLRLEELN--ADLIVQIK*RLLE 411
K +++ +DP SS ++ H + D Q+R + LN D ++ +K LL+
Sbjct: 128 KALMSLLRQDPKASSTALFTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLK 180
>At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 553
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 563 KWVVATTMEDPGNSSATIYNHTDIITVEDRQLRLEELN--ADLIVQIK*RLLE 411
K +++ +DP SS ++ H + D Q+R + LN D ++ +K LL+
Sbjct: 128 KALMSLLRQDPKASSTALFTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLK 180
>At3g43300.1 68416.m04570 guanine nucleotide exchange family protein
similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine
nucleotide-exchange protein 2 {Homo sapiens}; contains
Pfam profile PF01369: Sec7 domain
Length = 1756
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 79 LNFRTWETVGKKTDSDETTFRFKVVSYNVLAQYLLE 186
L FRT +G K DSDE T + +++S +L Q +LE
Sbjct: 338 LVFRTLCKMGMKEDSDEVTTKTRILSLELL-QGMLE 372
>At5g58840.1 68418.m07373 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]; non-consensus acceptor site TT at exon 6
Length = 713
Score = 27.9 bits (59), Expect = 8.3
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +1
Query: 145 KVVSYNVLAQYLLEYHPYLYIDCSPRNLKWKHRSRRLTKKFADCHLTYCASKKF-NCRIL 321
KV S V+A YH Y Y+ P S L+K D ++Y S K + +L
Sbjct: 379 KVSSEIVVANINENYHDYAYVSILP--------SSALSKDDFDSVISYVNSTKSPHGTVL 430
Query: 322 K-RSILNSKTSGTKGSSNRKPETGRTDAL 405
K +I N G S+R P T D L
Sbjct: 431 KSEAIFNQAAPKVAGFSSRGPNTIAVDIL 459
>At5g15270.2 68418.m01789 KH domain-containing protein various
predicted proteins, Arabidopsis thaliana and Oryza
sativa
Length = 548
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 485 VEDRQLRLEELNADLIVQIK*RLLEVNSASVLPVSGFLFEDP 360
V+DR + L LN+D ++QI +L V A +L ++ L E+P
Sbjct: 183 VKDRNMPLCALNSDELIQISGEVLIVKKA-LLQIASRLHENP 223
>At5g15270.1 68418.m01788 KH domain-containing protein various
predicted proteins, Arabidopsis thaliana and Oryza
sativa
Length = 548
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 485 VEDRQLRLEELNADLIVQIK*RLLEVNSASVLPVSGFLFEDP 360
V+DR + L LN+D ++QI +L V A +L ++ L E+P
Sbjct: 183 VKDRNMPLCALNSDELIQISGEVLIVKKA-LLQIASRLHENP 223
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,316,064
Number of Sequences: 28952
Number of extensions: 355836
Number of successful extensions: 1052
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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