Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0879.Seq
(806 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921... 98 6e-21
01_06_0161 + 27108920-27109279,27109479-27109598,27110301-271104... 33 0.27
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 31 0.82
05_06_0197 - 26297917-26299839 31 0.82
09_02_0099 + 4265550-4265663,4266794-4267024,4267619-4267681,426... 31 1.1
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592 31 1.1
07_03_1342 - 25891761-25892102,25892588-25893135,25893342-258950... 30 1.9
07_03_0053 + 12842096-12842539 30 1.9
01_03_0255 - 14281004-14281066,14281114-14281203,14281672-142817... 30 1.9
04_04_1665 - 35164114-35164188,35164361-35164415,35164535-351648... 30 2.5
11_04_0246 - 15311912-15312481 29 3.3
07_03_1791 - 29552218-29552427,29552858-29553358,29560369-295604... 29 3.3
05_07_0217 - 28469229-28469798 29 3.3
02_05_0839 - 32113992-32114210,32114321-32114484,32114612-321147... 29 3.3
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 29 4.4
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 29 5.8
04_04_1388 - 33179270-33180679 29 5.8
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 28 7.6
02_04_0466 - 23149906-23150046,23150129-23150279,23151684-231517... 28 7.6
02_04_0012 - 18891917-18893091,18893209-18893323,18893425-188934... 28 7.6
02_01_0224 - 1461924-1462227,1462602-1462798,1463059-1463213,146... 28 7.6
>12_02_0792 -
23191120-23191313,23191419-23191775,23192027-23192108,
23192186-23193097,23193190-23193346,23193540-23193694,
23194667-23194819,23195334-23195627,23195711-23195896,
23196062-23196662,23196868-23196992,23197101-23197197,
23197299-23197411,23198129-23198233
Length = 1176
Score = 98.3 bits (234), Expect = 6e-21
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 515 IDIDLSLTAFANARRYYDQKRNAAKKQQKTIESSGKALKSAEKKTKQTLKEAHTISNIIK 694
+++DLSL+A ANARR+Y+ K+ KQ+KT+ + KA K+AEKKT+ L + T++ I
Sbjct: 508 VEVDLSLSAHANARRWYELKKKQESKQEKTVTAHEKAFKAAEKKTRLQLAQEKTVAAITH 567
Query: 695 ARKTYWFEKFYWFISSDNYVVI 760
RK +WFEKF WFISS+NY++I
Sbjct: 568 MRKVHWFEKFNWFISSENYLII 589
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +3
Query: 279 RAAELIASNEPLVERARAAIQTALANQLSWDDIQLLVKTAQENKDSVASCIKHLKLNTNH 458
+ AELI N V+ A A++ +LAN +SWD + ++K ++ + VA I L N
Sbjct: 425 KMAELIEYNLEDVDAAIVAVRVSLANGMSWDALARMIKEEKKAGNPVAGLIDKLSFERNC 484
Query: 459 ITLLLS---DPYLHDEKPEP 509
ITLLLS D +EK P
Sbjct: 485 ITLLLSNNLDDMDEEEKTAP 504
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 59 EFHPLRFAQHENLPFAEYETFDRAVDEFFSASEGRRL 169
E+ P+ Q ++ F E+ETFD A+DEF+S E +R+
Sbjct: 351 EYCPVLLNQFKSREFNEFETFDAALDEFYSKIESQRV 387
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 760 SGRDQQQNELLVKRY 804
SGRD QQNEL+VKRY
Sbjct: 590 SGRDAQQNELIVKRY 604
>01_06_0161 +
27108920-27109279,27109479-27109598,27110301-27110438,
27110680-27110784,27110883-27111051,27111507-27111583,
27111796-27111840,27111984-27112022,27112374-27112457,
27112846-27112884,27112963-27113025,27113109-27113238,
27113319-27113374
Length = 474
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 213 AERAQGPREARDGAERAQTRDKRAAELIASNEPLVERA 326
AER +GP RDGA A+T+++ + +NE LVE A
Sbjct: 61 AERPRGPELCRDGA-AAETKEEVRRSEVVTNEQLVEEA 97
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 31.5 bits (68), Expect = 0.82
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 189 RTRSSEEAAERAQGPREARDGAERAQT----RDKRAAELIASNEPLVERARAAIQTALAN 356
R R++ EA ER + E R AER Q R +RAA A+ E +A AA A
Sbjct: 601 RERAASEAKERERAAAE-RAAAERVQQEARKRAERAAVERAAAEARERQAAAAAAAAREK 659
Query: 357 QLSWDDIQ 380
Q S DD++
Sbjct: 660 QSSADDLE 667
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3
Query: 177 DRTTRTRSSEEAAERAQGPREARDGAERAQTRDKRAAELIASNEPLVERARA 332
+R R+++EA ERA EAR AER T+ + A + + + ERA A
Sbjct: 538 ERQAMERATKEARERASA--EARAKAEREATQRAQRAAVQRAQQEARERAAA 587
>05_06_0197 - 26297917-26299839
Length = 640
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 207 EAAERAQGPREARDGAERAQTRDKRAAELIASNEPLVERARAAIQTALANQLSWDDI 377
EAA RA+ +AR A + R+KR AE A +E + AAI+ L ++ +++
Sbjct: 541 EAAARAE-EEKARAEALAREEREKRRAEAAAKDEAAARASAAAIEAILGHKRKTENV 596
>09_02_0099 +
4265550-4265663,4266794-4267024,4267619-4267681,
4267774-4268223
Length = 285
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 354 NQLSWDDIQLLVKTAQENKDSVASCIKHLKLNTNHITLLL 473
N++ + IQL VK Q+NK+ V +K L N NH+ L +
Sbjct: 12 NKMLHERIQLQVKQTQDNKEEVMQSLKLLN-NINHLGLFV 50
>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
Length = 853
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +3
Query: 174 EDRTTRTRSSEEAAERAQGPREARDGAERAQTRDKRAAELIASNEPL-VERARAAIQTAL 350
E+ + R++EEAAERA +EA++ A + AEL + L E ARAA +
Sbjct: 159 EEAEGKLRAAEEAAERA--GKEAQEHAAELRKHRAALAELATARRELEAELARAARRGDA 216
Query: 351 ANQLSWDDIQLLVKTAQENKDSVASCIKHLKLNTNHITLLLS 476
A + ++ + A + A C + L+ + H +LS
Sbjct: 217 AEAELGEALERRDEAASTAAELSAECAR-LRRDAEHKDKILS 257
>07_03_1342 -
25891761-25892102,25892588-25893135,25893342-25895012,
25895818-25896745
Length = 1162
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 359 LVGERRLY--GGPRALHERLVAGDELGGALVPGLRALSSVTRLSWS 228
L GE +L G RAL +AG+ G L PG+ LSS+ L S
Sbjct: 84 LAGELKLVTLSGMRALQNLSLAGNAFSGRLPPGIGYLSSLRHLDLS 129
>07_03_0053 + 12842096-12842539
Length = 147
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 189 RTRSSEEAAERAQGPREARDGAERAQTRDKRAAELIASNEPLVERAR 329
R E +E A REA AERA+ +RAAE++ + + ER R
Sbjct: 77 RAEMVERVSEEAAVEREAARAAERAEMAAERAAEMV--EQRVAERLR 121
>01_03_0255 -
14281004-14281066,14281114-14281203,14281672-14281737,
14281837-14281907,14282021-14282153,14282245-14283898,
14285346-14285935
Length = 888
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 189 RTRSSEEAAERAQGPREARDGAERAQTRDKRAAELIASNE-PLVERARAAIQTALANQ 359
R R++ EA E+A EAR AERA DK AAE E VERA A + AN+
Sbjct: 650 RERAATEAREKAAA--EARAKAERAAV-DKVAAEARRRAERAAVERAAAEARQRAANE 704
Score = 29.9 bits (64), Expect = 2.5
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 180 RTTRTRSSEEAAERAQGPREARDGAERAQTRDKRAAELIASNEPLVE-RARAAIQTALAN 356
R R R++ EA R Q REAR AERA + K AAE A E R RAA A A
Sbjct: 577 REARERAAAEA--RMQAEREARQRAERAAVQ-KAAAE--ARERAAAEARERAAKAAAEAK 631
Query: 357 Q-LSWDDIQLLVKTAQENKDSVAS 425
+ ++ + + K A E ++ A+
Sbjct: 632 ERVAEEARERAAKAAAEARERAAT 655
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 174 EDRTTRTRSSEEAAERAQGPREARDGAER--AQTRDKRAAELIASNEPLVERARAAIQTA 347
E R R + + AERA + A + ER A+ R++ A + E + E AR A
Sbjct: 586 EARMQAEREARQRAERAAVQKAAAEARERAAAEARERAAKAAAEAKERVAEEARERAAKA 645
Query: 348 LA 353
A
Sbjct: 646 AA 647
>04_04_1665 -
35164114-35164188,35164361-35164415,35164535-35164844,
35165401-35165521,35165701-35165796,35166163-35166266,
35167368-35167485
Length = 292
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 559 VLRPKAKRGQKAAKDNRILGKSS*KRRKEDEANFEGSSHDQQHYKS 696
V+R K G+KA KD + GKSS + +F +SHD +K+
Sbjct: 80 VVRQKRAEGKKALKDYLLFGKSSPHLQGGSTGSF-ANSHDIPRFKT 124
>11_04_0246 - 15311912-15312481
Length = 189
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 189 RTRSSEEAAERAQGPREARDGAERAQTRDKRAAELIASNEPLVERA 326
RT + E +E A +EA AERA+ +RAA A+ VE A
Sbjct: 117 RTAAVERVSEEAAVEKEAARAAERAEMAAERAAARRAAEMATVEMA 162
>07_03_1791 -
29552218-29552427,29552858-29553358,29560369-29560449,
29563783-29564015,29564976-29565042
Length = 363
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 171 HEDRTTRTRSSEEAAERAQG-PREARDGAERAQTRDKRAAELIASNEPLVERARAAIQTA 347
H + + S+E A+RAQ R A+ ERA+ D+R + L AS+E A A+++
Sbjct: 126 HLSQREQDARSQEQAQRAQELERRAKALEERARLLDQRESTL-ASHERTAAEAEASLRLC 184
Query: 348 LANQLSWDDIQLLVKTA 398
D L VK +
Sbjct: 185 EEAAAERDRTTLAVKAS 201
>05_07_0217 - 28469229-28469798
Length = 189
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 189 RTRSSEEAAERAQGPREARDGAERAQTRDKRAAELIASNEPLVERA 326
RT + E +E A +EA AERA+ +RAA A+ VE A
Sbjct: 117 RTAAVERVSEEAAVEKEAARAAERAEMAAERAAARRAAEMATVEMA 162
>02_05_0839 -
32113992-32114210,32114321-32114484,32114612-32114708,
32115822-32115944,32116770-32117141
Length = 324
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 177 DRTTRTRSSEEAAERAQGPREARDGAERAQTRDKRAAELIASNEPLVERARAA 335
+ TT + +EA + PREA++ + Q +++ A + A+ +ERA AA
Sbjct: 264 EETTPAMAPKEAKPQDDPPREAQNQPGKIQLTEEQRARMEANRLRALERAAAA 316
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 177 DRTTRTRSSEEAAE-RAQGPREARDGAERA--QTRDKRAAELIASN-EPLVERARA 332
+R T+ AAE RA+ REAR AERA Q K A E A + ERA A
Sbjct: 568 ERATKEARERAAAEARAKAEREARQRAERAAVQRAQKEARERAAVDARERAERAAA 623
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +3
Query: 174 EDRTTRTRSSEEAAERAQGPREARDGAERAQTRDKRAAELIASNEPLVERARAAIQTALA 353
E R R + + AERA R ++ ERA + AE A+ ERA A + +A
Sbjct: 581 EARAKAEREARQRAERAAVQRAQKEARERAAVDARERAERAAAEAK--ERAAAEAKEKVA 638
Query: 354 NQ 359
Q
Sbjct: 639 TQ 640
>12_02_1286 - 27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 563 YDQKRNAAK---KQQKTIESSGKALKSAEKKTKQTLKEAHTISNIIKARK 703
Y+QKR+ K ++T ES K LKS +++ + EA ISN ++ K
Sbjct: 859 YEQKRDMQAPIIKLKETRESLEKELKSLQERESEARAEAEQISNQMEELK 908
>04_04_1388 - 33179270-33180679
Length = 469
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 639 SALLRAFPEDSIVFCCFLAAFRFWS*YLLALAKAVNDKSMSIIMV 505
SA L AFPE S+V+ CF + ALA+A+ ++ + V
Sbjct: 274 SAWLDAFPEGSVVYVCFGSQAVLTPAMAAALAEALERSAVPFVWV 318
>08_02_1236 + 25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 180 RTTRTRSSEEAAERAQGPREARDGAERAQTRDKRAAELIASNEPLVERARAA 335
R + ++EA ER + R+A ERA+ R K+ AEL+ +R R +
Sbjct: 1289 RLEQKAKAKEAEERKR--RKAEKALERAEFRAKKEAELMEKRRAKRDRTRGS 1338
>02_04_0466 -
23149906-23150046,23150129-23150279,23151684-23151785,
23151893-23152110,23152203-23152325,23152863-23152991,
23153191-23153274,23154009-23154104,23154735-23154816,
23155047-23155117,23155269-23155363,23156090-23156276,
23156586-23156757,23157800-23157948,23158578-23158701,
23158836-23158991,23159101-23159247,23160470-23160489
Length = 748
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/84 (25%), Positives = 40/84 (47%)
Frame = +3
Query: 216 ERAQGPREARDGAERAQTRDKRAAELIASNEPLVERARAAIQTALANQLSWDDIQLLVKT 395
ERA+ EAR A + + A A+ + E +AA + + ++Q S +++ T
Sbjct: 249 ERAKQEAEARQKAAAKLAVEAQKAAAEAAAKEAAEAQKAAAEVSKSSQNSQNNV---AGT 305
Query: 396 AQENKDSVASCIKHLKLNTNHITL 467
+ NK + S + +K+ +H L
Sbjct: 306 MRANKSEIKSELPGIKVFADHSAL 329
>02_04_0012 -
18891917-18893091,18893209-18893323,18893425-18893477,
18893553-18893813,18896451-18896501,18896629-18896877,
18897046-18897268,18897371-18897487
Length = 747
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 666 SFKVCFVFFSALLRAFPED-SIVFCCFLAAFRFWS*YLLALAKAV 535
S +C++ +A LR FPED F L A FW +++A+ A+
Sbjct: 328 SVALCYMGQAAYLRKFPEDVGDTFYKSLPAPLFWPVFVVAIMAAI 372
>02_01_0224 -
1461924-1462227,1462602-1462798,1463059-1463213,
1464101-1464207,1464289-1464375,1465332-1465414,
1465959-1466027,1466332-1466658,1466744-1466957,
1467170-1467267,1467516-1467554,1467672-1468160
Length = 722
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 488 SRREAGTMMIDIDLSLTAFANARRYYDQKRNAAKKQQKTIESSGKALKSAE 640
+ + AG+M +DID S+ A AN + A+ ++ +T+ K L S +
Sbjct: 212 ANKYAGSMAMDIDQSVHAPANGALHTGDSCLASTRRAETLNGRNKELSSPQ 262
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,323,275
Number of Sequences: 37544
Number of extensions: 300955
Number of successful extensions: 1223
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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