Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0879.Seq
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK000913-1|BAA91420.1| 518|Homo sapiens protein ( Homo sapiens ... 90 1e-17
BC056687-1|AAH56687.1| 426|Homo sapiens SDCCAG1 protein protein. 87 9e-17
BC006001-1|AAH06001.1| 398|Homo sapiens Unknown (protein for IM... 87 9e-17
AL137797-2|CAI19185.1| 382|Homo sapiens diencephalon/mesencepha... 33 1.6
AF398528-1|AAM90590.1| 382|Homo sapiens homeoprotein MBX-L prot... 33 1.6
M33308-1|AAA61283.1| 1066|Homo sapiens VCL protein. 31 3.7
BC039174-1|AAH39174.1| 1066|Homo sapiens vinculin protein. 31 3.7
AL731576-5|CAI39673.1| 1066|Homo sapiens vinculin protein. 31 3.7
AL731576-1|CAI39669.1| 806|Homo sapiens vinculin protein. 31 3.7
AL596247-9|CAI13972.1| 1066|Homo sapiens vinculin protein. 31 3.7
Y12661-1|CAA73210.1| 616|Homo sapiens neuro-endocrine specific ... 31 6.5
AY508996-1|AAS82571.1| 1606|Homo sapiens P-Rex2 protein. 31 6.5
AJ437636-1|CAD26885.2| 1606|Homo sapiens P-Rex2 protein protein. 31 6.5
AF093265-1|AAC71029.1| 358|Homo sapiens homer-3 protein. 30 8.6
>AK000913-1|BAA91420.1| 518|Homo sapiens protein ( Homo sapiens
cDNA FLJ10051 fis, clone HEMBA1001281. ).
Length = 518
Score = 89.8 bits (213), Expect = 1e-17
Identities = 39/60 (65%), Positives = 53/60 (88%)
Frame = +2
Query: 509 MMIDIDLSLTAFANARRYYDQKRNAAKKQQKTIESSGKALKSAEKKTKQTLKEAHTISNI 688
+++D+DLSL+A+ANA++YYD KR AAKK QKT+E++ KA KSAEKKTKQTLKE T+++I
Sbjct: 459 LLVDVDLSLSAYANAKKYYDHKRYAAKKTQKTVEAAEKAFKSAEKKTKQTLKEVQTVTSI 518
Score = 86.6 bits (205), Expect = 9e-17
Identities = 42/87 (48%), Positives = 58/87 (66%)
Frame = +3
Query: 246 DGAERAQTRDKRAAELIASNEPLVERARAAIQTALANQLSWDDIQLLVKTAQENKDSVAS 425
+ ++AQ DK ELI N +V+RA +++ALANQ+ W +I L+VK AQ D VAS
Sbjct: 335 EALQQAQEIDKLKGELIEMNLQIVDRAIQVVRSALANQIDWTEIGLIVKEAQAQGDPVAS 394
Query: 426 CIKHLKLNTNHITLLLSDPYLHDEKPE 506
IK LKL TNH+T+LL +PYL E+ +
Sbjct: 395 AIKELKLQTNHVTMLLRNPYLLSEEED 421
Score = 58.0 bits (134), Expect = 4e-08
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 KKEERPNPEGEPTY--LLTNIEFHPLRFAQHENLPFAEYETFDRAVDEFFSASEGRRL 169
K+E +P E + +LT EFHP F+QH P+ E+E+FD+AVDEF+S EG+++
Sbjct: 251 KREIKPCLEADKPVEDILTYEEFHPFLFSQHSQCPYIEFESFDKAVDEFYSKIEGQKI 308
Score = 48.0 bits (109), Expect = 4e-05
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 160 QKIDMKTVQLEREALKKLQNVRKDHERRVTEL 255
QKID+K +Q E++ALKKL NVRKDHE R+ L
Sbjct: 306 QKIDLKALQQEKQALKKLDNVRKDHENRLEAL 337
>BC056687-1|AAH56687.1| 426|Homo sapiens SDCCAG1 protein protein.
Length = 426
Score = 86.6 bits (205), Expect = 9e-17
Identities = 42/87 (48%), Positives = 58/87 (66%)
Frame = +3
Query: 246 DGAERAQTRDKRAAELIASNEPLVERARAAIQTALANQLSWDDIQLLVKTAQENKDSVAS 425
+ ++AQ DK ELI N +V+RA +++ALANQ+ W +I L+VK AQ D VAS
Sbjct: 312 EALQQAQEIDKLKGELIEMNLQIVDRAIQVVRSALANQIDWTEIGLIVKEAQAQGDPVAS 371
Query: 426 CIKHLKLNTNHITLLLSDPYLHDEKPE 506
IK LKL TNH+T+LL +PYL E+ +
Sbjct: 372 AIKELKLQTNHVTMLLRNPYLLSEEED 398
Score = 58.0 bits (134), Expect = 4e-08
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 KKEERPNPEGEPTY--LLTNIEFHPLRFAQHENLPFAEYETFDRAVDEFFSASEGRRL 169
K+E +P E + +LT EFHP F+QH P+ E+E+FD+AVDEF+S EG+++
Sbjct: 228 KREIKPCLEADKPVEDILTYEEFHPFLFSQHSQCPYIEFESFDKAVDEFYSKIEGQKI 285
Score = 48.0 bits (109), Expect = 4e-05
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 160 QKIDMKTVQLEREALKKLQNVRKDHERRVTEL 255
QKID+K +Q E++ALKKL NVRKDHE R+ L
Sbjct: 283 QKIDLKALQQEKQALKKLDNVRKDHENRLEAL 314
>BC006001-1|AAH06001.1| 398|Homo sapiens Unknown (protein for
IMAGE:4094709) protein.
Length = 398
Score = 86.6 bits (205), Expect = 9e-17
Identities = 42/87 (48%), Positives = 58/87 (66%)
Frame = +3
Query: 246 DGAERAQTRDKRAAELIASNEPLVERARAAIQTALANQLSWDDIQLLVKTAQENKDSVAS 425
+ ++AQ DK ELI N +V+RA +++ALANQ+ W +I L+VK AQ D VAS
Sbjct: 293 EALQQAQEIDKLKGELIEMNLQIVDRAIQVVRSALANQIDWTEIGLIVKEAQAQGDPVAS 352
Query: 426 CIKHLKLNTNHITLLLSDPYLHDEKPE 506
IK LKL TNH+T+LL +PYL E+ +
Sbjct: 353 AIKELKLQTNHVTMLLRNPYLLSEEED 379
Score = 58.0 bits (134), Expect = 4e-08
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 KKEERPNPEGEPTY--LLTNIEFHPLRFAQHENLPFAEYETFDRAVDEFFSASEGRRL 169
K+E +P E + +LT EFHP F+QH P+ E+E+FD+AVDEF+S EG+++
Sbjct: 209 KREIKPCLEADKPVEDILTYEEFHPFLFSQHSQCPYIEFESFDKAVDEFYSKIEGQKI 266
Score = 48.0 bits (109), Expect = 4e-05
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 160 QKIDMKTVQLEREALKKLQNVRKDHERRVTEL 255
QKID+K +Q E++ALKKL NVRKDHE R+ L
Sbjct: 264 QKIDLKALQQEKQALKKLDNVRKDHENRLEAL 295
>AL137797-2|CAI19185.1| 382|Homo sapiens diencephalon/mesencephalon
homeobox 1 protein.
Length = 382
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +2
Query: 425 LHQ--ASQAQHQPHYAAALRPLP-SRREAGTMMIDIDLSLTAFANARRYYDQKRNAAKKQ 595
LHQ A QAQH P Y ++ L + R AG DI L + + R + R A Q
Sbjct: 23 LHQQAAQQAQHAPDYRPSVHALTLAERLAGCTFQDIILE-ARYGSQHRKQRRSRTAFTAQ 81
Query: 596 QKTIESSGKALKSAEKKTKQTLKEAHTISNIIKARKTYWFE 718
Q +E+ K + + +N+ +AR WF+
Sbjct: 82 Q--LEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFK 120
>AF398528-1|AAM90590.1| 382|Homo sapiens homeoprotein MBX-L
protein.
Length = 382
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +2
Query: 425 LHQ--ASQAQHQPHYAAALRPLP-SRREAGTMMIDIDLSLTAFANARRYYDQKRNAAKKQ 595
LHQ A QAQH P Y ++ L + R AG DI L + + R + R A Q
Sbjct: 23 LHQQAAQQAQHAPDYRPSVHALTLAERLAGCTFQDIILE-ARYGSQHRKQRRSRTAFTAQ 81
Query: 596 QKTIESSGKALKSAEKKTKQTLKEAHTISNIIKARKTYWFE 718
Q +E+ K + + +N+ +AR WF+
Sbjct: 82 Q--LEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFK 120
>M33308-1|AAA61283.1| 1066|Homo sapiens VCL protein.
Length = 1066
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 246 DGAERAQTRDKRAAELIASNEPLVERARAAIQTALANQLSWDDIQLLVKTAQENKDSVAS 425
D R + D+RAA + L A A AN+ + + IQ VKTA+E V S
Sbjct: 618 DAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVS 677
Query: 426 CIKHLKLN 449
+ L N
Sbjct: 678 AARILLRN 685
>BC039174-1|AAH39174.1| 1066|Homo sapiens vinculin protein.
Length = 1066
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 246 DGAERAQTRDKRAAELIASNEPLVERARAAIQTALANQLSWDDIQLLVKTAQENKDSVAS 425
D R + D+RAA + L A A AN+ + + IQ VKTA+E V S
Sbjct: 618 DAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVS 677
Query: 426 CIKHLKLN 449
+ L N
Sbjct: 678 AARILLRN 685
>AL731576-5|CAI39673.1| 1066|Homo sapiens vinculin protein.
Length = 1066
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 246 DGAERAQTRDKRAAELIASNEPLVERARAAIQTALANQLSWDDIQLLVKTAQENKDSVAS 425
D R + D+RAA + L A A AN+ + + IQ VKTA+E V S
Sbjct: 618 DAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVS 677
Query: 426 CIKHLKLN 449
+ L N
Sbjct: 678 AARILLRN 685
>AL731576-1|CAI39669.1| 806|Homo sapiens vinculin protein.
Length = 806
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 246 DGAERAQTRDKRAAELIASNEPLVERARAAIQTALANQLSWDDIQLLVKTAQENKDSVAS 425
D R + D+RAA + L A A AN+ + + IQ VKTA+E V S
Sbjct: 290 DAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVS 349
Query: 426 CIKHLKLN 449
+ L N
Sbjct: 350 AARILLRN 357
>AL596247-9|CAI13972.1| 1066|Homo sapiens vinculin protein.
Length = 1066
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 246 DGAERAQTRDKRAAELIASNEPLVERARAAIQTALANQLSWDDIQLLVKTAQENKDSVAS 425
D R + D+RAA + L A A AN+ + + IQ VKTA+E V S
Sbjct: 618 DAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVS 677
Query: 426 CIKHLKLN 449
+ L N
Sbjct: 678 AARILLRN 685
>Y12661-1|CAA73210.1| 616|Homo sapiens neuro-endocrine specific
protein VGF protein.
Length = 616
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 204 EEAAERAQGPREARDGAERAQTRDKRAAELIASNEPLVERAR 329
E A E + +E R G ER D+ AAE + ERAR
Sbjct: 359 ESAREEEEAEQERRGGEERVGEEDEEAAEAAEAEADEAERAR 400
>AY508996-1|AAS82571.1| 1606|Homo sapiens P-Rex2 protein.
Length = 1606
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 363 SWDDIQLLVKTAQENKDSVASCIKHLKLNTNHITLLL 473
S D++ L V+ + + +D + SC++HL + IT LL
Sbjct: 1140 SGDELPLSVRISHDKQDKIHSCLEHLFSQVDSITNLL 1176
>AJ437636-1|CAD26885.2| 1606|Homo sapiens P-Rex2 protein protein.
Length = 1606
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 363 SWDDIQLLVKTAQENKDSVASCIKHLKLNTNHITLLL 473
S D++ L V+ + + +D + SC++HL + IT LL
Sbjct: 1140 SGDELPLSVRISHDKQDKIHSCLEHLFSQVDSITNLL 1176
>AF093265-1|AAC71029.1| 358|Homo sapiens homer-3 protein.
Length = 358
Score = 30.3 bits (65), Expect = 8.6
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Frame = +3
Query: 186 TRTRSSEEAAERAQGPREARDGAERAQTRDK---RAAEL---IASNEPLVERARAAIQTA 347
T+ + + + GPREA + AER +T+ K R AEL + + E +E ARA + A
Sbjct: 266 TKDQEIQTLKSQTGGPREALEAAEREETQQKVQTRNAELEHQLRAMERSLEEARAERERA 325
Query: 348 LA 353
A
Sbjct: 326 RA 327
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,190,315
Number of Sequences: 237096
Number of extensions: 1529489
Number of successful extensions: 5390
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5390
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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