Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0870.Seq
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58754-4|AAX22292.1|  332|Caenorhabditis elegans Serpentine rece...    28   5.1  
Z81513-3|CAB04185.3|  476|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z48230-4|CAO78721.1|  484|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z48230-3|CAA88263.1|  515|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z48006-7|CAO78729.1|  484|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z48006-6|CAA88051.1|  515|Caenorhabditis elegans Hypothetical pr...    28   6.8  
L15314-7|AAF99989.1|  346|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF039052-5|AAF98626.2|  586|Caenorhabditis elegans Hypothetical ...    28   6.8  

>U58754-4|AAX22292.1|  332|Caenorhabditis elegans Serpentine
           receptor, class sx protein15 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 510 NVLFLFLVCLRELSSFVVWFYLFSFKRCIQTINNHLVH 397
           NV FL  +C+R L   +V F +F F   I     H++H
Sbjct: 206 NVQFLERMCMRTLKYLIVLFVVFRFITSIILNLLHIIH 243


>Z81513-3|CAB04185.3|  476|Caenorhabditis elegans Hypothetical
           protein F26D2.3a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 22/67 (32%), Positives = 30/67 (44%)
 Frame = +2

Query: 215 ILRFTNYNSKNSGLFGNCYYTAVSHGITELFLE*SNGVCQSNI*FLSFHKYLFCFNFKST 394
           I RF+ +   N     NC    V H I    +E  + +  S    LSF+K L  F+F   
Sbjct: 360 ISRFSRWVPINLERSSNCASGTVRHDICIFGIE--DFLAVSKYPTLSFNKMLPAFDFSII 417

Query: 395 QCTK*LL 415
           +CT  LL
Sbjct: 418 ECTAELL 424


>Z48230-4|CAO78721.1|  484|Caenorhabditis elegans Hypothetical
           protein F19C6.4b protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +3

Query: 444 KDKTTRQNLTIPSNKQEIKIIR*QLDILHNSYFFTLKYGKIELTICMLLHYAVEQQHLFA 623
           KD  +  NLT     QE++I++  + I +N  F  L   KI + +  ++ +  E + LF 
Sbjct: 39  KDTRSISNLTFTKMNQELEILKPNVTIENNGTFIAL--DKI-VKLTRVMKWCTEIEVLFT 95

Query: 624 GFY 632
           G +
Sbjct: 96  GVF 98


>Z48230-3|CAA88263.1|  515|Caenorhabditis elegans Hypothetical
           protein F19C6.4a protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +3

Query: 444 KDKTTRQNLTIPSNKQEIKIIR*QLDILHNSYFFTLKYGKIELTICMLLHYAVEQQHLFA 623
           KD  +  NLT     QE++I++  + I +N  F  L   KI + +  ++ +  E + LF 
Sbjct: 39  KDTRSISNLTFTKMNQELEILKPNVTIENNGTFIAL--DKI-VKLTRVMKWCTEIEVLFT 95

Query: 624 GFY 632
           G +
Sbjct: 96  GVF 98


>Z48006-7|CAO78729.1|  484|Caenorhabditis elegans Hypothetical
           protein F19C6.4b protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +3

Query: 444 KDKTTRQNLTIPSNKQEIKIIR*QLDILHNSYFFTLKYGKIELTICMLLHYAVEQQHLFA 623
           KD  +  NLT     QE++I++  + I +N  F  L   KI + +  ++ +  E + LF 
Sbjct: 39  KDTRSISNLTFTKMNQELEILKPNVTIENNGTFIAL--DKI-VKLTRVMKWCTEIEVLFT 95

Query: 624 GFY 632
           G +
Sbjct: 96  GVF 98


>Z48006-6|CAA88051.1|  515|Caenorhabditis elegans Hypothetical
           protein F19C6.4a protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +3

Query: 444 KDKTTRQNLTIPSNKQEIKIIR*QLDILHNSYFFTLKYGKIELTICMLLHYAVEQQHLFA 623
           KD  +  NLT     QE++I++  + I +N  F  L   KI + +  ++ +  E + LF 
Sbjct: 39  KDTRSISNLTFTKMNQELEILKPNVTIENNGTFIAL--DKI-VKLTRVMKWCTEIEVLFT 95

Query: 624 GFY 632
           G +
Sbjct: 96  GVF 98


>L15314-7|AAF99989.1|  346|Caenorhabditis elegans Hypothetical
           protein K06H7.8 protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +2

Query: 470 DNSLKQTRNKNNTLTAGYLTQ-QLLFHTKIRQNRVDDLYAL 589
           D+ LK  R +  T   G      +  H +  Q RVDDL+AL
Sbjct: 176 DDGLKMRRPREKTYFRGTARYCSVAMHDRYEQGRVDDLWAL 216


>AF039052-5|AAF98626.2|  586|Caenorhabditis elegans Hypothetical
           protein T22D1.4 protein.
          Length = 586

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +2

Query: 467 LDNSLKQTRNKNNTLTAGYLTQQLLFHTKIRQNRVDDLYA 586
           +DN LK    K+ T TAG   QQ L   K  +NR D + A
Sbjct: 546 VDNYLKAVE-KSTTKTAGTEEQQFLNKVKDARNRADSVLA 584


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,264,412
Number of Sequences: 27780
Number of extensions: 284144
Number of successful extensions: 602
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)