Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0869.Seq
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 58 6e-09
U64441-1|AAB06457.1| 549|Caenorhabditis elegans nonsense-mediat... 33 0.15
U64440-1|AAB06456.1| 549|Caenorhabditis elegans nonsense-mediat... 33 0.15
AF003141-6|AAK21489.1| 549|Caenorhabditis elegans Suppressor wi... 33 0.15
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 32 0.35
Z68118-8|CAA92189.2| 289|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z30662-2|CAA83135.1| 181|Caenorhabditis elegans Hypothetical pr... 29 1.9
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 27 9.9
CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical ... 27 9.9
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 27 9.9
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 27 9.9
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 27 9.9
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 27 9.9
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 27 9.9
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 27 9.9
AF025469-4|AAG00032.1| 270|Caenorhabditis elegans Hypothetical ... 27 9.9
AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical ... 27 9.9
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 57.6 bits (133), Expect = 6e-09
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +2
Query: 95 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVM 256
S FDLT ++ +LD HL+ PLLEF+ + YD+ L + ++L+KTNMID V+
Sbjct: 2 STFDLTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLTEMHRQLLTKTNMIDSVI 55
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/82 (21%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 274 YPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPK---TLINHL 444
Y + P I ++ ++ E EL+ V+ V+ +++ +V + ++ R+ ++ HL
Sbjct: 58 YNGKPIPAAIEAKKKQIIKERDELKSKVDSVVAILEIPEVKEMMDNNRERDGNVRILEHL 117
Query: 445 STNKEYEFKIEMIDSMYRLAKF 510
+ N + F ++M+D++++ +KF
Sbjct: 118 TQN--HNFTVDMVDTLFKYSKF 137
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 498 FGQIRYECGNYVESASYLYFCQLVLSPTD 584
+ + YECGNY ++ LY+ + +++ D
Sbjct: 134 YSKFMYECGNYTVASVCLYYYRNLVNQAD 162
>U64441-1|AAB06457.1| 549|Caenorhabditis elegans nonsense-mediated
mRNA decay proteinprotein.
Length = 549
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 561 DKSKDMMLTPHNFHIHSEFGQTIHAIDHFNFKLILLVCR---KMVYKSFRIPHGFNCFHY 391
+KSK M I +EF I F++ LI+ CR K+ K F +NCF
Sbjct: 208 EKSKRMDYQMTGIKIVNEFKAEIEQKLEFDWSLIMSTCRLASKLAMKKFGFQQFYNCFDT 267
Query: 390 IISLHESQY 364
I +L+ + Y
Sbjct: 268 ISTLYITIY 276
>U64440-1|AAB06456.1| 549|Caenorhabditis elegans nonsense-mediated
mRNA decay proteinprotein.
Length = 549
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 561 DKSKDMMLTPHNFHIHSEFGQTIHAIDHFNFKLILLVCR---KMVYKSFRIPHGFNCFHY 391
+KSK M I +EF I F++ LI+ CR K+ K F +NCF
Sbjct: 208 EKSKRMDYQMTGIKIVNEFKAEIEQKLEFDWSLIMSTCRLASKLAMKKFGFQQFYNCFDT 267
Query: 390 IISLHESQY 364
I +L+ + Y
Sbjct: 268 ISTLYITIY 276
>AF003141-6|AAK21489.1| 549|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 5 protein.
Length = 549
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 561 DKSKDMMLTPHNFHIHSEFGQTIHAIDHFNFKLILLVCR---KMVYKSFRIPHGFNCFHY 391
+KSK M I +EF I F++ LI+ CR K+ K F +NCF
Sbjct: 208 EKSKRMDYQMTGIKIVNEFKAEIEQKLEFDWSLIMSTCRLASKLAMKKFGFQQFYNCFDT 267
Query: 390 IISLHESQY 364
I +L+ + Y
Sbjct: 268 ISTLYITIY 276
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/78 (23%), Positives = 39/78 (50%)
Frame = -1
Query: 486 IDHFNFKLILLVCRKMVYKSFRIPHGFNCFHYIISLHESQYWLYCILKFLQFRKNYTSPL 307
++H + K I C + V ++ H F +++++ + S+Y + I+ LQ+ TS
Sbjct: 2727 VEHHDLKRIKSACVQSVRRAVAFSHAFRVWNWLLRMVSSEYSVSDII--LQYLTTLTS-- 2782
Query: 306 YNFFRSVFFRIEHSSDVI 253
YN F + +S+++
Sbjct: 2783 YNRLAEYMFSAKKNSNIL 2800
>Z68118-8|CAA92189.2| 289|Caenorhabditis elegans Hypothetical
protein R01E6.7 protein.
Length = 289
Score = 30.7 bits (66), Expect = 0.80
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 167 LAAKETYDQSELLQAKLEILSKTNMIDYVMTSEECSILKKTLLKKLYS 310
LA YD+ LL+ K++ K M D EC +++ T L ++YS
Sbjct: 162 LAGYPQYDRHRLLRIKMDTSKKLLMYDETDKERECLVVRST-LSEMYS 208
>Z30662-2|CAA83135.1| 181|Caenorhabditis elegans Hypothetical
protein T16H12.2 protein.
Length = 181
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 268 MLYPEEDTPEEIIQRRGVVLSELQELQDAVEP 363
+LYP++DTP +I++ R L Q+ +D EP
Sbjct: 129 ILYPKKDTPPKILRARRRSLIRAQKKKDFQEP 160
>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical
protein ZK430.5 protein.
Length = 1276
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = -1
Query: 528 NFHIHSEFGQTIHAIDHFNFKLILLVCRKMVYKSFRIPHGFNCFHYIISLHESQYWLYCI 349
+F I+S F Q AI HFN + L+ R+++ +S + HG + ++ + + + C+
Sbjct: 490 SFMIYSNFSQL--AIKHFNDEFALIRKRELLRESQIMMHGDSSIQPKPNIIQHEIFGMCV 547
Query: 348 LKFL 337
+++L
Sbjct: 548 IRWL 551
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
F29G6.3c protein.
Length = 1453
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 567 PVDKSKDMMLTPHNFHIHSEFGQTIHAID 481
P +S++ LT N H H ++ IH D
Sbjct: 1400 PTPRSRNATLTQENVHEHDQYDDLIHVAD 1428
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 567 PVDKSKDMMLTPHNFHIHSEFGQTIHAID 481
P +S++ LT N H H ++ IH D
Sbjct: 719 PTPRSRNATLTQENVHEHDQYDDLIHVAD 747
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical
protein ZK637.8f protein.
Length = 889
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 246 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 289
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 251 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 294
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical
protein ZK637.8d protein.
Length = 899
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 262 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 305
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 251 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 294
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical
protein ZK637.8b protein.
Length = 883
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 246 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 289
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical
protein ZK637.8a protein.
Length = 905
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 262 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 305
>CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical
protein C42C1.7 protein.
Length = 710
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 369 QYWLYCILKFLQFRKNYTSPLYNFFRSVFFRI 274
++ YC+L + +TSP F SVF RI
Sbjct: 170 KFGYYCLLGVISISYYFTSPQTTAFNSVFARI 201
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 246 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 289
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 251 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 294
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 262 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 305
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 251 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 294
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 246 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 289
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 217 GDFEQN*HDRLCYDIRRMLYPEEDTPEEIIQRRGVVLSELQELQ 348
GD + ++C R LYP DTP+E + V++ +++L+
Sbjct: 262 GDHLKTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIEDLK 305
>AF025469-4|AAG00032.1| 270|Caenorhabditis elegans Hypothetical
protein W09B6.5 protein.
Length = 270
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 451 NKEYEFKIEMIDSMY--RLAKFAMNVEIMWSQHHIFTFVN-WCC 573
N E++ K ++ +Y LA + ++ + S H IFTF WCC
Sbjct: 148 NGEFQKKKSVLLCVYFFSLAFNSYSLSLRLSDHFIFTFYRYWCC 191
>AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical
protein K09F6.3 protein.
Length = 1360
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +1
Query: 322 VLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPKTLINHLSTNKEYEFKIEMIDS 489
+++ L L+ E + L + + KT++T+ K L+N + TN ++E + S
Sbjct: 358 IIAPLTYLESIKEVEILLQAIESLKKTVDTLVGTKELVNWVKTNDVVLKEVEALCS 413
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,744,314
Number of Sequences: 27780
Number of extensions: 245761
Number of successful extensions: 753
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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