Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0866.Seq
         (505 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024961-1|ABE01191.1| 1186|Drosophila melanogaster IP15272p pro...    29   2.7  
BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p pro...    29   2.7  
BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p pro...    29   2.7  
X05939-1|CAA29373.1|  657|Drosophila melanogaster protein ( Dros...    29   3.6  
M11281-1|AAA70367.1|  441|Drosophila melanogaster Myb protein.         29   3.6  
BT003262-1|AAO25019.1|  657|Drosophila melanogaster LD22943p pro...    29   3.6  
AY070561-1|AAL48032.1|  538|Drosophila melanogaster LD37523p pro...    29   3.6  
AE014298-2256|AAS65358.1|  657|Drosophila melanogaster CG9045-PE...    29   3.6  
AE014298-2255|AAS65357.1|  657|Drosophila melanogaster CG9045-PD...    29   3.6  
AE014298-2254|AAS65356.1|  657|Drosophila melanogaster CG9045-PC...    29   3.6  
AE014298-2253|AAS65355.1|  657|Drosophila melanogaster CG9045-PB...    29   3.6  
AE014298-2252|AAF48529.1|  657|Drosophila melanogaster CG9045-PA...    29   3.6  
AE014297-149|AAF52095.1|  538|Drosophila melanogaster CG2503-PA ...    29   3.6  

>BT024961-1|ABE01191.1| 1186|Drosophila melanogaster IP15272p
           protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 21/83 (25%), Positives = 32/83 (38%)
 Frame = +3

Query: 126 TNRFTKPRIVGDSQQIVGIRAEVIAHLLAENDLVANSRSKLNTFADSGGWIYGPRLNDDI 305
           TN   +    GD   I+G   +   H   E+ L  NS +           +Y PR     
Sbjct: 720 TNSLLRTLCHGDDSIILGTWLQETNHRTIEDQLQPNSAAGSGALEHDPCCLYRPRSAQGN 779

Query: 306 GRSKNGANGRRIDSSGTNSPNGT 374
           G S NG++     + G+N   G+
Sbjct: 780 GSSSNGSSA--TSTGGSNGGGGS 800


>BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p
           protein.
          Length = 2106

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 21/83 (25%), Positives = 32/83 (38%)
 Frame = +3

Query: 126 TNRFTKPRIVGDSQQIVGIRAEVIAHLLAENDLVANSRSKLNTFADSGGWIYGPRLNDDI 305
           TN   +    GD   I+G   +   H   E+ L  NS +           +Y PR     
Sbjct: 720 TNSLLRTLCHGDDSIILGTWLQETNHRTIEDQLQPNSAAGSGALEHDPCCLYRPRSAQGN 779

Query: 306 GRSKNGANGRRIDSSGTNSPNGT 374
           G S NG++     + G+N   G+
Sbjct: 780 GSSSNGSSA--TSTGGSNGGGGS 800


>BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p protein.
          Length = 2154

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 21/83 (25%), Positives = 32/83 (38%)
 Frame = +3

Query: 126  TNRFTKPRIVGDSQQIVGIRAEVIAHLLAENDLVANSRSKLNTFADSGGWIYGPRLNDDI 305
            TN   +    GD   I+G   +   H   E+ L  NS +           +Y PR     
Sbjct: 768  TNSLLRTLCHGDDSIILGTWLQETNHRTIEDQLQPNSAAGSGALEHDPCCLYRPRSAQGN 827

Query: 306  GRSKNGANGRRIDSSGTNSPNGT 374
            G S NG++     + G+N   G+
Sbjct: 828  GSSSNGSSA--TSTGGSNGGGGS 848


>X05939-1|CAA29373.1|  657|Drosophila melanogaster protein (
           Drosophila melanogasterD-myb mRNA. ).
          Length = 657

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 213 ENDLVANSRSKLNTFADSGGWIYGPRLNDDIGRSKNGANGRRIDSSGTNSPN---GTRW 380
           E+  V +  S+ N+ ADSG  +  P L D     + G N     S G   PN   G RW
Sbjct: 30  EDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRW 88


>M11281-1|AAA70367.1|  441|Drosophila melanogaster Myb protein.
          Length = 441

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 213 ENDLVANSRSKLNTFADSGGWIYGPRLNDDIGRSKNGANGRRIDSSGTNSPN---GTRW 380
           E+  V +  S+ N+ ADSG  +  P L D     + G N     S G   PN   G RW
Sbjct: 30  EDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRW 88


>BT003262-1|AAO25019.1|  657|Drosophila melanogaster LD22943p
           protein.
          Length = 657

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 213 ENDLVANSRSKLNTFADSGGWIYGPRLNDDIGRSKNGANGRRIDSSGTNSPN---GTRW 380
           E+  V +  S+ N+ ADSG  +  P L D     + G N     S G   PN   G RW
Sbjct: 30  EDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRW 88


>AY070561-1|AAL48032.1|  538|Drosophila melanogaster LD37523p
           protein.
          Length = 538

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 228 ANSRSKLNTFADSGGWIYGPRLNDDIGRSKNGANGRRIDSSGTNSPNGTR 377
           A+SRSK  + + SG      R N   G  K+G+  R +  S + S +G+R
Sbjct: 445 ASSRSKSGSRSGSGS---RSRTNSPAGSQKSGSRSRSVSRSRSRSKSGSR 491


>AE014298-2256|AAS65358.1|  657|Drosophila melanogaster CG9045-PE,
           isoform E protein.
          Length = 657

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 213 ENDLVANSRSKLNTFADSGGWIYGPRLNDDIGRSKNGANGRRIDSSGTNSPN---GTRW 380
           E+  V +  S+ N+ ADSG  +  P L D     + G N     S G   PN   G RW
Sbjct: 30  EDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRW 88


>AE014298-2255|AAS65357.1|  657|Drosophila melanogaster CG9045-PD,
           isoform D protein.
          Length = 657

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 213 ENDLVANSRSKLNTFADSGGWIYGPRLNDDIGRSKNGANGRRIDSSGTNSPN---GTRW 380
           E+  V +  S+ N+ ADSG  +  P L D     + G N     S G   PN   G RW
Sbjct: 30  EDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRW 88


>AE014298-2254|AAS65356.1|  657|Drosophila melanogaster CG9045-PC,
           isoform C protein.
          Length = 657

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 213 ENDLVANSRSKLNTFADSGGWIYGPRLNDDIGRSKNGANGRRIDSSGTNSPN---GTRW 380
           E+  V +  S+ N+ ADSG  +  P L D     + G N     S G   PN   G RW
Sbjct: 30  EDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRW 88


>AE014298-2253|AAS65355.1|  657|Drosophila melanogaster CG9045-PB,
           isoform B protein.
          Length = 657

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 213 ENDLVANSRSKLNTFADSGGWIYGPRLNDDIGRSKNGANGRRIDSSGTNSPN---GTRW 380
           E+  V +  S+ N+ ADSG  +  P L D     + G N     S G   PN   G RW
Sbjct: 30  EDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRW 88


>AE014298-2252|AAF48529.1|  657|Drosophila melanogaster CG9045-PA,
           isoform A protein.
          Length = 657

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 213 ENDLVANSRSKLNTFADSGGWIYGPRLNDDIGRSKNGANGRRIDSSGTNSPN---GTRW 380
           E+  V +  S+ N+ ADSG  +  P L D     + G N     S G   PN   G RW
Sbjct: 30  EDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRW 88


>AE014297-149|AAF52095.1|  538|Drosophila melanogaster CG2503-PA
           protein.
          Length = 538

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 228 ANSRSKLNTFADSGGWIYGPRLNDDIGRSKNGANGRRIDSSGTNSPNGTR 377
           A+SRSK  + + SG      R N   G  K+G+  R +  S + S +G+R
Sbjct: 445 ASSRSKSGSRSGSGS---RSRTNSPAGSQKSGSRSRSVSRSRSRSKSGSR 491


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,512,499
Number of Sequences: 53049
Number of extensions: 592739
Number of successful extensions: 2170
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2168
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)