Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0866.Seq
         (505 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical pr...    32   0.27 
Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical pr...    32   0.27 
AC091125-8|AAP46267.1|  353|Caenorhabditis elegans Hypothetical ...    29   1.4  
AC091125-7|AAK27890.1|  510|Caenorhabditis elegans Hypothetical ...    29   1.4  
AL132948-46|CAD31837.2|  473|Caenorhabditis elegans Hypothetical...    28   3.3  
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr...    27   5.8  
U41109-1|ABC48251.1|  248|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = -1

Query: 343 SILRPLAPFFDLPMSSFSRGPYIQPPLSAKVLSLLRLFATRSFSASKCAITSA 185
           S L PL P  D P+ SFS G  ++    A   SLLR     S S SK AI+S+
Sbjct: 20  SSLNPLLPSEDTPIQSFSNGVSLEEGKQAS-SSLLRDTGQPSSSRSKEAISSS 71


>Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = -1

Query: 343 SILRPLAPFFDLPMSSFSRGPYIQPPLSAKVLSLLRLFATRSFSASKCAITSA 185
           S L PL P  D P+ SFS G  ++    A   SLLR     S S SK AI+S+
Sbjct: 20  SSLNPLLPSEDTPIQSFSNGVSLEEGKQAS-SSLLRDTGQPSSSRSKEAISSS 71


>AC091125-8|AAP46267.1|  353|Caenorhabditis elegans Hypothetical
           protein Y67D2.1b protein.
          Length = 353

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 102 ANACAGAGAPTVAQHQQRHYGGDW 31
           A+ACA AG   +   +  +YGGDW
Sbjct: 24  ASACARAGLSVLHLDRNEYYGGDW 47


>AC091125-7|AAK27890.1|  510|Caenorhabditis elegans Hypothetical
           protein Y67D2.1a protein.
          Length = 510

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 102 ANACAGAGAPTVAQHQQRHYGGDW 31
           A+ACA AG   +   +  +YGGDW
Sbjct: 24  ASACARAGLSVLHLDRNEYYGGDW 47


>AL132948-46|CAD31837.2|  473|Caenorhabditis elegans Hypothetical
           protein Y39B6A.27 protein.
          Length = 473

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -2

Query: 492 LSTRVSISRTATIPTTPSSRW---VKVRRTATNQPIAITKTIWCRLASL 355
           L+T  S+S   T+P T +S W   V+  R  ++  I +    +C +ASL
Sbjct: 158 LATITSLSTPPTVPQTANSTWQEEVRHERRYSDFEIKLLSAAFCGMASL 206


>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
            R10E11.1b protein.
          Length = 2056

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -2

Query: 111  PDGANACAGAGAPTVAQHQQRHYGGDWPAG 22
            P  A    G G   + QHQ  H GG  PAG
Sbjct: 1688 PGPAVKGGGVGQVQMQQHQGSHVGGSGPAG 1717


>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
            R10E11.1a protein.
          Length = 2045

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -2

Query: 111  PDGANACAGAGAPTVAQHQQRHYGGDWPAG 22
            P  A    G G   + QHQ  H GG  PAG
Sbjct: 1677 PGPAVKGGGVGQVQMQQHQGSHVGGSGPAG 1706


>U41109-1|ABC48251.1|  248|Caenorhabditis elegans Hypothetical
           protein F52E1.5 protein.
          Length = 248

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 47  CRCWCCATVGAPAPAHAFAPSG 112
           C+C+  + VG+  P H F P+G
Sbjct: 226 CKCFVGSGVGSKLPVHYFKPAG 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,467,614
Number of Sequences: 27780
Number of extensions: 279612
Number of successful extensions: 814
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)