Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0865.Seq
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    25   0.62 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    25   0.62 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.6  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -3

Query: 86  RLNRVRSDIALINLIIIFLVVPLNI 12
           R+N +   +A+ +L++ FL++PL I
Sbjct: 87  RINTMLMHLAIADLLVTFLMMPLEI 111


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -3

Query: 86  RLNRVRSDIALINLIIIFLVVPLNI 12
           R+N +   +A+ +L++ FL++PL I
Sbjct: 87  RINTMLMHLAIADLLVTFLMMPLEI 111


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 4/21 (19%), Positives = 15/21 (71%)
 Frame = +3

Query: 549 YVVFIKHSYSLWSSYMRVVIV 611
           +++F+ +    WSS++++ ++
Sbjct: 540 FMIFVTYQLYCWSSFLKISVL 560


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 525 FTCHCGFNYVVFIKHSYSLWSS 590
           +TCHC + Y       Y  W S
Sbjct: 83  YTCHCPYGYTGKDCGEYVDWCS 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,137
Number of Sequences: 336
Number of extensions: 3378
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)