Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0862.Seq
         (759 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.9  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   7.7  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   7.7  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   7.7  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   7.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 673 EDLHRLDIQPTKTQFPSVATILKKPFEED 587
           E+   +D+ PT    P    IL K FE+D
Sbjct: 692 EEAVPVDLNPTIYYGPDYTVILDKEFEDD 720


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 651 SSRQRHNFRRWLQFLRNRLRKT*H*LGL-NDFEINEYI*NKSCVVKFNL 508
           S +  H+  + LQF+ NR++K      L +D++    + ++ C+  F L
Sbjct: 423 SHKDLHHILKELQFITNRMKKADEEQELISDWKFAAMVVDRFCLFVFTL 471


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 651 SSRQRHNFRRWLQFLRNRLRKT*H*LGL-NDFEINEYI*NKSCVVKFNL 508
           S +  H+  + LQF+ NR++K      L +D++    + ++ C+  F L
Sbjct: 423 SHKDLHHILKELQFITNRMKKADEEQELISDWKFAAMVVDRFCLFVFTL 471


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 603 FLRIVATDGNCVFVGWISSRCRSSLQITLQD 695
           F+   A DG   +  W+   CR+ + + L+D
Sbjct: 407 FISSTAPDGKAKYQEWVQDSCRNIVHV-LED 436


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = +3

Query: 627 GNC-VFVGWISSRCRSSLQ 680
           G C  +VGWI   C  +LQ
Sbjct: 490 GQCQCYVGWIGKTCECNLQ 508


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,084
Number of Sequences: 2352
Number of extensions: 14128
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)