Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0862.Seq
         (759 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g07390.1 68418.m00846 respiratory burst oxidase protein A (Rb...    31   0.83 
At1g22620.1 68414.m02824 phosphoinositide phosphatase family pro...    28   7.7  

>At5g07390.1 68418.m00846 respiratory burst oxidase protein A
           (RbohA) / NADPH oxidase identical to respiratory burst
           oxidase protein A from Arabidopsis thaliana [gi:3242781]
          Length = 902

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 240 YKTFFYSHHFMYYIYKVVIVNHLYVLQLI 154
           +  F+YSHH    +Y +++V+  YV  +I
Sbjct: 522 FNAFWYSHHLFVIVYSLLVVHGFYVYLII 550


>At1g22620.1 68414.m02824 phosphoinositide phosphatase family
           protein contains similarity to phosphoinositide
           phosphatase SAC1 [Rattus norvegicus]
           gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
           SacI homology domain; identical to cDNA SAC domain
           protein 1 (SAC1)  SAC1-FRA7 allele, GI:31415718
          Length = 912

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 737 RGFFYSFTYPVSSIVLKSDLQGGSAPTRY 651
           + FFYS+TYP+   + K+ L  G     Y
Sbjct: 180 KDFFYSYTYPIMQSLQKNVLSSGEEGMPY 208


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,801,323
Number of Sequences: 28952
Number of extensions: 287847
Number of successful extensions: 552
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)