Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0860X.Seq
         (434 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    24   0.54 
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    24   0.54 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.7  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 24.2 bits (50), Expect = 0.54
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 421 RKSVRQSLAQWFDFQTIQHG 362
           R+  R+ +AQW +  T QHG
Sbjct: 37  RQWTREHVAQWINLVTQQHG 56


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 24.2 bits (50), Expect = 0.54
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 421 RKSVRQSLAQWFDFQTIQHG 362
           R+  R+ +AQW +  T QHG
Sbjct: 37  RQWTREHVAQWINLVTQQHG 56


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 325 LVEPLFSISSRGNPLFPTTSNSWSPQGS 242
           L+E  F   SR N  FP    + +P GS
Sbjct: 735 LIEKSFDSRSRQNSSFPGHGPTTAPMGS 762



 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 322 VEPLFSISSRGNPLFPTTSNSWSPQGSVLSPF 227
           V PL S SS    +FP  +   SP G  +  F
Sbjct: 177 VSPLISSSSSPPGVFPVDAPMHSPPGDGILDF 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,952
Number of Sequences: 336
Number of extensions: 1917
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)