Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0860X.Seq
         (434 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel prot...    33   0.42 
EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel prot...    33   0.42 
EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel, voltage...    33   0.42 
DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ...    33   0.42 
AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel ...    33   0.42 
AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium ch...    33   0.42 
AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium ch...    33   0.42 
AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium ch...    33   0.42 
AK094887-1|BAC04450.1|  272|Homo sapiens protein ( Homo sapiens ...    31   2.3  
M77235-1|AAA58644.1| 2016|Homo sapiens sodium channel alpha subu...    30   4.0  
AY957526-1|AAX57550.1|  128|Homo sapiens anti-oxLDL immunoglobul...    30   4.0  
AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium ch...    30   4.0  
AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens ...    30   4.0  
AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel ...    30   4.0  
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.          29   9.1  
AF062197-1|AAC18233.1|  132|Homo sapiens immunoglobulin heavy ch...    29   9.1  

>EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel
           protein.
          Length = 1998

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  AG S +HHT LLV  PL   S++G P  P TS
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581


>EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel
           protein.
          Length = 2016

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  AG S +HHT LLV  PL   S++G P  P TS
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581


>EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel,
           voltage-gated, type V, alpha (long QT syndrome 3)
           protein.
          Length = 2015

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  AG S +HHT LLV  PL   S++G P  P TS
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581


>DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein
           type V alpha subunit protein.
          Length = 2016

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  AG S +HHT LLV  PL   S++G P  P TS
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581


>AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel
           alpha subunit Nav1.5 protein.
          Length = 2015

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  AG S +HHT LLV  PL   S++G P  P TS
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581


>AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium
           channel type V alpha isoform b variant protein.
          Length = 1576

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  AG S +HHT LLV  PL   S++G P  P TS
Sbjct: 113 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 160


>AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium
           channel splicing variant protein.
          Length = 1962

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  AG S +HHT LLV  PL   S++G P  P TS
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581


>AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium
           channel protein.
          Length = 2016

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  AG S +HHT LLV  PL   S++G P  P TS
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581


>AK094887-1|BAC04450.1|  272|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37568 fis, clone BRCOC2002323. ).
          Length = 272

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = -3

Query: 426 DVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAGARK 247
           D  KAF+K+ H  ++  L  +G+  + + IIR           + G +    LLT G R+
Sbjct: 6   DAEKAFNKIKHPFMLKTLNKLGIDGTHIKIIRAIYDKPIANIILNGQKLEGFLLTTGTRQ 65

Query: 246 ALSSHP 229
                P
Sbjct: 66  GCPLSP 71


>M77235-1|AAA58644.1| 2016|Homo sapiens sodium channel alpha subunit
           protein.
          Length = 2016

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  A  S +HHT LLV  PL   S++G P  P TS
Sbjct: 534 RRDLGSEADFADDENSTARESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581


>AY957526-1|AAX57550.1|  128|Homo sapiens anti-oxLDL immunoglobulin
           heavy chain variable region protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 172 LFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKW 65
           L +DDT VYY +R++ +I   +    L  G WF  W
Sbjct: 86  LRSDDTAVYYCARSRPII---MGRGVLPPGHWFDLW 118


>AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium
           channel type V alpha subunit jejunal variant protein.
          Length = 2015

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  A  S +HHT LLV  PL   S++G P  P TS
Sbjct: 534 RRDLGSEADFADDENSTARESESHHTSLLVPWPLRRTSAQGQP-SPGTS 581


>AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45551 fis, clone BRTHA2037247. ).
          Length = 238

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = -3

Query: 426 DVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAGARK 247
           D  KAF+K+ H  ++  L  +G+    + IIR     R+    + G +     L  G R+
Sbjct: 31  DAEKAFNKIQHRFMLKTLNKLGIEGPCLKIIRAICDKRTANIILNGQQLEAFPLKTGTRQ 90

Query: 246 ALSSHP 229
                P
Sbjct: 91  GCPLSP 96


>AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel
           alpha subunit protein.
          Length = 2015

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 409 RQSLAQWFDFQTIQHGRAG*SRAHHTGLLVE-PLFSISSRGNPLFPTTS 266
           R+ L    DF   ++  AG S +H T LLV  PL   S++G P  P TS
Sbjct: 534 RRDLGSEADFADDENSTAGESESHRTSLLVPWPLRRTSAQGQP-SPGTS 581


>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
          Length = 1275

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = -3

Query: 426 DVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAGARK 247
           D  KAFDK+    ++  L  +G+  +   IIR      +   R+ G +     L  G R+
Sbjct: 600 DAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIRLNGQKLEAFPLKTGTRQ 659

Query: 246 ALSSHP 229
                P
Sbjct: 660 GCPLSP 665


>AF062197-1|AAC18233.1|  132|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 132

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 172 LFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKW 65
           L +DDT VYY +R +S        +    G WF  W
Sbjct: 86  LRSDDTAVYYCARVRSSWGYCSGGSCYGTGNWFDPW 121


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,670,641
Number of Sequences: 237096
Number of extensions: 1302321
Number of successful extensions: 8004
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8000
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)