Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0860X.Seq
(434 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 77 8e-15
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 77 8e-15
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 62 3e-10
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 58 7e-09
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 57 1e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 56 2e-08
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 56 2e-08
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 55 4e-08
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 55 4e-08
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 55 4e-08
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 55 4e-08
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 53 1e-07
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 53 1e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 52 3e-07
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 52 3e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 50 1e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 50 1e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 50 1e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 50 1e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 50 1e-06
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 50 2e-06
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 41 8e-04
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 36 0.024
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 33 0.13
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 32 0.39
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 31 0.68
BT022778-1|AAY55194.1| 327|Drosophila melanogaster IP13968p pro... 28 6.3
AY058580-1|AAL13809.1| 453|Drosophila melanogaster LD27389p pro... 28 6.3
AF012089-2|AAB65750.2| 452|Drosophila melanogaster phenylalanyl... 28 6.3
AE014134-861|AAF52209.1| 600|Drosophila melanogaster CG9121-PA ... 28 6.3
AE013599-1806|AAF58310.1| 453|Drosophila melanogaster CG13348-P... 28 6.3
DQ177375-1|ABA60836.1| 528|Drosophila melanogaster Iris protein. 27 8.3
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 77.4 bits (182), Expect = 8e-15
Identities = 40/108 (37%), Positives = 61/108 (56%)
Frame = -2
Query: 325 LVEPLFSISSRGNPLFPTTSNSWSPQGSVLSPFLFSLFVNDIPRSPPTNLALFADDTTVY 146
L FS++ + N+ PQGSVL P LF++F +DIP++ L+LFADD VY
Sbjct: 643 LTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVY 702
Query: 145 YSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQRGSSTR 2
+ + S I + +QS L +++KW+I INP K+ A+ F + R
Sbjct: 703 SAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPR 750
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = -3
Query: 426 DVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAG 256
D+ AFD VWH+GL+ KL +G P L+ I+++FL++R F + ++S+ R+L AG
Sbjct: 609 DIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAG 665
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 77.4 bits (182), Expect = 8e-15
Identities = 40/108 (37%), Positives = 61/108 (56%)
Frame = -2
Query: 325 LVEPLFSISSRGNPLFPTTSNSWSPQGSVLSPFLFSLFVNDIPRSPPTNLALFADDTTVY 146
L FS++ + N+ PQGSVL P LF++F +DIP++ L+LFADD VY
Sbjct: 591 LTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVY 650
Query: 145 YSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQRGSSTR 2
+ + S I + +QS L +++KW+I INP K+ A+ F + R
Sbjct: 651 SAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPR 698
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = -3
Query: 426 DVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAG 256
D+ AFD VWH+GL+ KL +G P L+ I+++FL++R F + ++S+ R+L AG
Sbjct: 557 DIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAG 613
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 62.1 bits (144), Expect = 3e-10
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRSP-----PTNLALFADDTTVYYSSRNKSLIAKKLQSAALA 89
PQGSVL P L+ L+ +D+P+ + LA FADD V Y SR + A +Q A
Sbjct: 641 PQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYR 700
Query: 88 LGQWFRKWRIDINPAKSTAVLF 23
+W R+W I IN +KS V F
Sbjct: 701 FSEWARRWNIGINSSKSNNVCF 722
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAGA 253
F D+ +AFD+VWH GL K+ +P +++ +L R F R S+ + AG
Sbjct: 582 FLDIREAFDRVWHIGLQLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGV 640
Query: 252 RKALSSHP-SYLAYS 211
+ P Y YS
Sbjct: 641 PQGSVLGPLLYCLYS 655
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 57.6 bits (133), Expect = 7e-09
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Frame = -2
Query: 310 FSISSRGNPLFPTTSNSWSPQGSVLSPFLFSLFVNDIP------RSPPTN--LALFADDT 155
F + R + P + PQGSVL P L+S+F D+P + P LA +ADD
Sbjct: 623 FMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDI 682
Query: 154 TVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKS 38
+ YSS + A+ LQ L W ++W + +NP K+
Sbjct: 683 ALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKT 721
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAG 256
F D+ +AFD+VWH+GLI K+ + P +++ +L +R F RV + S PR++ AG
Sbjct: 583 FIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAG 640
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRSPPTNLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWF 74
PQGSVL P L+ ++ DIP + ++ FADDT + SR+ +L + + +W
Sbjct: 639 PQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWL 698
Query: 73 RKWRIDINPAKSTAVLF 23
WRI +N K V F
Sbjct: 699 SDWRIKVNEQKCKHVTF 715
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAGA 253
F DV++AFDKVW +GL+FK+ + +P+S +++ +L +R F R S+ + AG
Sbjct: 580 FLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGV 638
Query: 252 RKALSSHPS-YLAYSSTIFPGRRRPI*LYSPTTRLFT 145
+ P+ YL Y++ I R + ++ T + +
Sbjct: 639 PQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTAILS 675
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAGA 253
F D+ +AFD+VWH GL++K + P L L+++ FL R+F V+G +SS + + AG
Sbjct: 584 FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGV 642
Query: 252 RKALSSHPS-YLAYSS 208
+ P+ Y ++S
Sbjct: 643 PQGSVLGPTLYSVFAS 658
Score = 54.0 bits (124), Expect = 8e-08
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRSPPTN--------LALFADDTTVYYSSRNKSLIAKKLQSA 98
PQGSVL P L+S+F +D+P P +A +ADDT V S++ LQ
Sbjct: 643 PQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEY 702
Query: 97 ALALGQWFRKWRIDINPAKSTAVLF 23
A QW W + IN K V F
Sbjct: 703 LDAFQQWAENWNVRINAEKCANVTF 727
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAGA 253
F D+ +AFD+VWH GL++K + P L L+++ FL R+F V+G +SS + + AG
Sbjct: 386 FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGV 444
Query: 252 RKALSSHPS-YLAYSS 208
+ P+ Y ++S
Sbjct: 445 PQGSVLGPTLYSVFAS 460
Score = 54.0 bits (124), Expect = 8e-08
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRSPPTN--------LALFADDTTVYYSSRNKSLIAKKLQSA 98
PQGSVL P L+S+F +D+P P +A +ADDT V S++ LQ
Sbjct: 445 PQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEY 504
Query: 97 ALALGQWFRKWRIDINPAKSTAVLF 23
A QW W + IN K V F
Sbjct: 505 LDAFQQWAENWNVRINAEKCANVTF 529
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSS 277
F D+ +AFD+VWH+GL++KL + +P L ++ ++LSNR+F R++G +S
Sbjct: 183 FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 233
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRS--------------PPTN--LALFADDTTVYYSSRNKSL 122
PQGS+L P L+S++ +D+P PTN LA +ADDT + S+ L
Sbjct: 243 PQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKL 302
Query: 121 IAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 23
Q+ +W +KW I IN K+ +LF
Sbjct: 303 AINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 335
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSS 277
F D+ +AFD+VWH+GL++KL + +P L ++ ++LSNR+F R++G +S
Sbjct: 630 FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 680
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRS--------------PPTN--LALFADDTTVYYSSRNKSL 122
PQGS+L P L+S++ +D+P PTN LA +ADDT + S+ L
Sbjct: 690 PQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKL 749
Query: 121 IAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 23
Q+ +W +KW I IN K+ +LF
Sbjct: 750 AINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSS 277
F D+ +AFD+VWH+GL++KL + +P L ++ ++LSNR+F R++G +S
Sbjct: 630 FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 680
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRS--------------PPTN--LALFADDTTVYYSSRNKSL 122
PQGS+L P L+S++ +D+P PTN LA +ADDT + S+ L
Sbjct: 690 PQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKL 749
Query: 121 IAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 23
Q+ +W +KW I IN K+ +LF
Sbjct: 750 AINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSS 277
F D+ +AFD+VWH+GL++KL + +P L ++ ++LSNR+F R++G +S
Sbjct: 630 FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 680
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRS--------------PPTN--LALFADDTTVYYSSRNKSL 122
PQGS+L P L+S++ +D+P PTN LA +ADDT + S+ L
Sbjct: 690 PQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKL 749
Query: 121 IAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 23
Q+ +W +KW I IN K+ +LF
Sbjct: 750 AINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/83 (33%), Positives = 37/83 (44%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRSPPTNLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWF 74
PQGSVL P L++L+ D P + FADDT + S+ L ++ +W
Sbjct: 637 PQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWL 696
Query: 73 RKWRIDINPAKSTAVLFQRGSST 5
WRI IN K V F T
Sbjct: 697 ADWRISINVQKCKQVTFTLNKQT 719
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAGA 253
F DVA+AFD+VW +GL+FK+ + +P + +++ +L NR F R + + S + AG
Sbjct: 578 FLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGV 636
Query: 252 RKALSSHPSYLAYSSTIFP 196
+ P + FP
Sbjct: 637 PQGSVLGPILYTLYTADFP 655
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/83 (33%), Positives = 37/83 (44%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRSPPTNLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWF 74
PQGSVL P L++L+ D P + FADDT + S+ L ++ +W
Sbjct: 637 PQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWL 696
Query: 73 RKWRIDINPAKSTAVLFQRGSST 5
WRI IN K V F T
Sbjct: 697 ADWRISINVQKCKQVTFTLNKQT 719
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAGA 253
F DVA+AFD+VW +GL+FK+ + +P + +++ +L N F R + + S + AG
Sbjct: 578 FLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGV 636
Query: 252 RKALSSHPSYLAYSSTIFP 196
+ P + FP
Sbjct: 637 PQGSVLGPILYTLYTADFP 655
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRLLTAG 256
F D+++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AG
Sbjct: 627 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAG 685
Query: 255 ARKALSSHP-SYLAYSSTI-FPGRRRPI*LYSPTTRL 151
+ + P Y +SS + P RP SPT R+
Sbjct: 686 VPQGSNLGPLLYSIFSSDMPLPYIYRP----SPTERI 718
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIP-----RSPPTN---LALFADDTTVYYSSRNKSLIAKKLQSA 98
PQGS L P L+S+F +D+P R PT L+ +ADDT V S + + ++
Sbjct: 687 PQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENY 746
Query: 97 ALALGQWFRKWRIDINPAKSTAVLF 23
+ W KW I +N AK+ V+F
Sbjct: 747 LKSFSDWADKWGISVNAAKTGHVIF 771
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRLLTAG 256
F D+++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AG
Sbjct: 639 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAG 697
Query: 255 ARKALSSHP-SYLAYSSTI-FPGRRRPI*LYSPTTRL 151
+ + P Y +SS + P RP SPT R+
Sbjct: 698 VPQGSNLGPLLYSIFSSDMPLPYIYRP----SPTQRI 730
Score = 51.2 bits (117), Expect = 6e-07
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIP-----RSPPTN---LALFADDTTVYYSSRNKSLIAKKLQSA 98
PQGS L P L+S+F +D+P R PT L+ +ADDT V S + + ++
Sbjct: 699 PQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENY 758
Query: 97 ALALGQWFRKWRIDINPAKSTAVLF 23
W KW I +N AK+ V+F
Sbjct: 759 LKTFSDWADKWGISVNAAKTGHVIF 783
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRLLTAG 256
F D+++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AG
Sbjct: 511 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAG 569
Query: 255 ARKALSSHPSYLAYSSTIFP 196
+ + P + S+ P
Sbjct: 570 VPQGSNLGPILYSIFSSDMP 589
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIP-----RSPPTN---LALFADDTTVYYSSRNKSLIAKKLQSA 98
PQGS L P L+S+F +D+P PT L+ +ADDT V S + + ++
Sbjct: 571 PQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENY 630
Query: 97 ALALGQWFRKWRIDINPAKSTAVLF 23
W KW I +N AK+ V++
Sbjct: 631 LKTFSDWADKWGISVNAAKTGHVIY 655
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRLLTAG 256
F D+++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AG
Sbjct: 627 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAG 685
Query: 255 ARKALSSHPSYLAYSSTIFP 196
+ + P + S+ P
Sbjct: 686 VPQGSNLGPILYSIFSSDMP 705
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIP-----RSPPTN---LALFADDTTVYYSSRNKSLIAKKLQSA 98
PQGS L P L+S+F +D+P PT L+ +ADDT V S + + ++
Sbjct: 687 PQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENY 746
Query: 97 ALALGQWFRKWRIDINPAKSTAVLF 23
W KW I +N AK+ V++
Sbjct: 747 LKTFSDWADKWGISVNAAKTGHVIY 771
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRLLTAG 256
F D+++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AG
Sbjct: 627 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAG 685
Query: 255 ARKALSSHPSYLAYSSTIFP 196
+ + P + S+ P
Sbjct: 686 VPQGSNLGPILYSIFSSDMP 705
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIP-----RSPPTN---LALFADDTTVYYSSRNKSLIAKKLQSA 98
PQGS L P L+S+F +D+P PT L+ +ADDT V S + + ++
Sbjct: 687 PQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENY 746
Query: 97 ALALGQWFRKWRIDINPAKSTAVLF 23
W KW I +N AK+ V++
Sbjct: 747 LKTFSDWADKWGISVNAAKTGHVIY 771
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRLLTAG 256
F D+++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AG
Sbjct: 589 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAG 647
Query: 255 ARKALSSHPSYLAYSSTIFP 196
+ + P + S+ P
Sbjct: 648 VPQGSNLGPILYSIFSSDMP 667
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIP-----RSPPTN---LALFADDTTVYYSSRNKSLIAKKLQSA 98
PQGS L P L+S+F +D+P PT L+ +ADDT V S + + ++
Sbjct: 649 PQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENY 708
Query: 97 ALALGQWFRKWRIDINPAKSTAVLF 23
W KW I +N AK+ V++
Sbjct: 709 LKTFSDWADKWGISVNAAKTGHVIY 733
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRLLTAG 256
F D+++AFD+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AG
Sbjct: 627 FLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAG 685
Query: 255 ARKALSSHPSYLAYSSTIFP 196
+ + P + S+ P
Sbjct: 686 VPQGSNLGPILYSIFSSDMP 705
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIP-----RSPPTN---LALFADDTTVYYSSRNKSLIAKKLQSA 98
PQGS L P L+S+F +D+P PT L+ +ADDT V S + + ++
Sbjct: 687 PQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENY 746
Query: 97 ALALGQWFRKWRIDINPAKSTAVLF 23
W KW I +N AK+ V++
Sbjct: 747 LKTFSDWADKWGISVNAAKTGHVIY 771
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -3
Query: 432 FFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAGA 253
F DVA+AFD+VW +GL+FK+ + +P ++ +++ +L R F R + SS + AG
Sbjct: 119 FLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGV 177
Query: 252 RKALSSHP-SYLAYSSTI 202
+ P Y Y++ I
Sbjct: 178 PQGSVLGPILYTLYTADI 195
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -2
Query: 313 LFSISSRGNPLFPTTSNSWSPQGSVLSPFLFSLFVNDIPRSPPTNLALFADDTTVYYSSR 134
+F++ + T + PQGSVL P L++L+ DIP + + FADDT + SR
Sbjct: 158 VFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQLTIFTFADDTAIISRSR 217
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = -3
Query: 426 DVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAG 256
D +AFD+V + ++ +L G+ L +I+ F++NRSFR R+ S+ +L G
Sbjct: 584 DFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNG 640
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDIPRSP---PTNLALFADDTTVYYSSRNKSLIAKKLQSAALALG 83
PQGSVL P L++ + I R P + + FADD + + + A+
Sbjct: 52 PQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRAIE 111
Query: 82 QWFRKWRIDINPAKSTAVL 26
W +++ P K+ AVL
Sbjct: 112 HWLSSMGLELAPEKTKAVL 130
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -3
Query: 426 DVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRLLTAG 256
D ++AFD+V + +I +L ++ I++F+SNR RV SSP L G
Sbjct: 576 DFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNG 632
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 31.9 bits (69), Expect = 0.39
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = -2
Query: 253 PQGSVLSPFLFSLFVNDI-PRSPPTNLAL--FADDTTVYYSSRNKSLIAKKLQSAALALG 83
PQGSVL P L+++ + I S P + L FADD + ++ + A A
Sbjct: 614 PQGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITAAI 673
Query: 82 QWFRKWRIDINPAKSTAVLFQRGSS 8
+W K + I K+ VL S
Sbjct: 674 EWLEKVGLKIAAHKTEVVLLSSRKS 698
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 31.1 bits (67), Expect = 0.68
Identities = 22/102 (21%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = -2
Query: 301 SSRGNPLFPTTSNSWSPQGSVLSPFLFSLFVNDIPR--SPPTNLALFADDTTVYYSSRNK 128
SS G P T PQGS+ PF++ + ++ + + P L+ +ADD + ++
Sbjct: 619 SSSGTVEVPVTRGC--PQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSR 676
Query: 127 SLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQRGSSTR 2
+++ +K + W + ++ +K T ++ +G+ R
Sbjct: 677 AVLEEKGAQLMSIVETWGAEVGDCLSTSK-TVIMLLKGALRR 717
>BT022778-1|AAY55194.1| 327|Drosophila melanogaster IP13968p
protein.
Length = 327
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 336 IRDFLSNRSFRYRVEG--TRSSPRLLTAGARKALSSHPSYLAYSSTI 202
I+D ++ + +Y V G T+ + LL GAR+ S H +LA S +
Sbjct: 188 IQDKQNHTALQYAVRGRHTQMAKLLLERGARRLASQHLLHLAVESNV 234
>AY058580-1|AAL13809.1| 453|Drosophila melanogaster LD27389p
protein.
Length = 453
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 32 RSTFRWVDVYAPFSEP 79
R +RWVD Y PF++P
Sbjct: 256 RIKYRWVDTYFPFTQP 271
>AF012089-2|AAB65750.2| 452|Drosophila melanogaster phenylalanyl
tRNA synthetase protein.
Length = 452
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 32 RSTFRWVDVYAPFSEP 79
R +RWVD Y PF++P
Sbjct: 255 RIKYRWVDTYFPFTQP 270
>AE014134-861|AAF52209.1| 600|Drosophila melanogaster CG9121-PA
protein.
Length = 600
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 336 IRDFLSNRSFRYRVEG--TRSSPRLLTAGARKALSSHPSYLAYSSTI 202
I+D ++ + +Y V G T+ + LL GAR+ S H +LA S +
Sbjct: 275 IQDKQNHTALQYAVRGRHTQMAKLLLERGARRLASQHLLHLAVESNV 321
>AE013599-1806|AAF58310.1| 453|Drosophila melanogaster CG13348-PA
protein.
Length = 453
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 32 RSTFRWVDVYAPFSEP 79
R +RWVD Y PF++P
Sbjct: 256 RIKYRWVDTYFPFTQP 271
>DQ177375-1|ABA60836.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 239 DRALRAPAVRSRGE--ERVPST-RYRKERFDKKSRMMSTRL 352
D A+R+PAV RGE ERVPS Y + D KS S L
Sbjct: 397 DCAVRSPAVALRGEVRERVPSKGGYATLQKDPKSSQESVTL 437
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,348,154
Number of Sequences: 53049
Number of extensions: 381354
Number of successful extensions: 1221
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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