Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0853.Seq
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 163 7e-41
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 163 7e-41
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 162 2e-40
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 162 2e-40
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 162 2e-40
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 160 9e-40
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 159 2e-39
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 159 2e-39
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 157 8e-39
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 92 3e-19
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 90 1e-18
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 90 1e-18
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 85 5e-17
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 85 5e-17
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 85 5e-17
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 85 5e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 71 9e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 71 9e-13
At4g19490.2 68417.m02867 expressed protein 36 0.018
At4g19490.1 68417.m02866 expressed protein 36 0.018
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 32 0.39
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 30 1.6
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 30 1.6
At5g38600.1 68418.m04669 proline-rich spliceosome-associated (PS... 29 2.7
At1g33100.1 68414.m04087 MATE efflux family protein similar to r... 29 2.7
At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ b... 29 3.6
At1g26890.1 68414.m03279 hypothetical protein 28 6.3
At5g18475.1 68418.m02177 pentatricopeptide (PPR) repeat-containi... 27 8.3
At1g35110.1 68414.m04352 Ulp1 protease family protein similar to... 27 8.3
At1g29300.1 68414.m03582 expressed protein contains Pfam profile... 27 8.3
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 163 bits (397), Expect = 7e-41
Identities = 72/87 (82%), Positives = 83/87 (95%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
CFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GF
Sbjct: 211 CFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 181 APLTSRGSRQYRALTVPELTQQMFEPR 261
APLTSRGS+QYRALTVPELTQQM++ +
Sbjct: 271 APLTSRGSQQYRALTVPELTQQMWDAK 297
Score = 158 bits (384), Expect = 3e-39
Identities = 69/85 (81%), Positives = 79/85 (92%)
Frame = +3
Query: 255 AKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 434
AKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCD
Sbjct: 296 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 435 IPPRGLKMAATFIGNSTAIQELFKR 509
IPP GLKMA+TFIGNST+IQE+F+R
Sbjct: 356 IPPTGLKMASTFIGNSTSIQEMFRR 380
Score = 106 bits (255), Expect = 1e-23
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 655
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+AT
Sbjct: 381 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 163 bits (397), Expect = 7e-41
Identities = 72/87 (82%), Positives = 83/87 (95%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
CFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GF
Sbjct: 211 CFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 181 APLTSRGSRQYRALTVPELTQQMFEPR 261
APLTSRGS+QYRALTVPELTQQM++ +
Sbjct: 271 APLTSRGSQQYRALTVPELTQQMWDSK 297
Score = 155 bits (375), Expect = 3e-38
Identities = 67/85 (78%), Positives = 79/85 (92%)
Frame = +3
Query: 255 AKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 434
+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCD
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 355
Query: 435 IPPRGLKMAATFIGNSTAIQELFKR 509
I PRGL MA+TFIGNST+IQE+F+R
Sbjct: 356 IAPRGLSMASTFIGNSTSIQEMFRR 380
Score = 106 bits (255), Expect = 1e-23
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 655
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+AT
Sbjct: 381 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 162 bits (394), Expect = 2e-40
Identities = 71/87 (81%), Positives = 83/87 (95%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
CFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GF
Sbjct: 211 CFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 181 APLTSRGSRQYRALTVPELTQQMFEPR 261
APLTSRGS+QYR+LTVPELTQQM++ +
Sbjct: 271 APLTSRGSQQYRSLTVPELTQQMWDSK 297
Score = 158 bits (383), Expect = 3e-39
Identities = 69/85 (81%), Positives = 79/85 (92%)
Frame = +3
Query: 255 AKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 434
+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCD
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 435 IPPRGLKMAATFIGNSTAIQELFKR 509
IPP GLKMA+TFIGNST+IQE+F+R
Sbjct: 356 IPPTGLKMASTFIGNSTSIQEMFRR 380
Score = 106 bits (255), Expect = 1e-23
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 655
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+AT
Sbjct: 381 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 162 bits (394), Expect = 2e-40
Identities = 71/87 (81%), Positives = 83/87 (95%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
CFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GF
Sbjct: 211 CFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 181 APLTSRGSRQYRALTVPELTQQMFEPR 261
APLTSRGS+QYR+LTVPELTQQM++ +
Sbjct: 271 APLTSRGSQQYRSLTVPELTQQMWDSK 297
Score = 158 bits (383), Expect = 3e-39
Identities = 69/85 (81%), Positives = 79/85 (92%)
Frame = +3
Query: 255 AKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 434
+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCD
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 435 IPPRGLKMAATFIGNSTAIQELFKR 509
IPP GLKMA+TFIGNST+IQE+F+R
Sbjct: 356 IPPTGLKMASTFIGNSTSIQEMFRR 380
Score = 106 bits (255), Expect = 1e-23
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 655
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+AT
Sbjct: 381 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 162 bits (394), Expect = 2e-40
Identities = 72/87 (82%), Positives = 82/87 (94%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
CFRTLKLSTP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GF
Sbjct: 211 CFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 181 APLTSRGSRQYRALTVPELTQQMFEPR 261
APLTSRGS+QYR LTVPELTQQM++ +
Sbjct: 271 APLTSRGSQQYRNLTVPELTQQMWDAK 297
Score = 159 bits (386), Expect = 2e-39
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +3
Query: 255 AKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 434
AKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCD
Sbjct: 296 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 435 IPPRGLKMAATFIGNSTAIQELFKR 509
IPP GLKMA+TFIGNST+IQE+F+R
Sbjct: 356 IPPTGLKMASTFIGNSTSIQEMFRR 380
Score = 106 bits (255), Expect = 1e-23
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 655
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+AT
Sbjct: 381 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 160 bits (388), Expect = 9e-40
Identities = 70/85 (82%), Positives = 81/85 (95%)
Frame = +3
Query: 255 AKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 434
+KNMM A DPRHGRYLT +AIFRG+MS KEVDEQ+LNIQNKNSSYFVEWIPNNVK++VCD
Sbjct: 297 SKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCD 356
Query: 435 IPPRGLKMAATFIGNSTAIQELFKR 509
IPP+GLKMAATF+GNST+IQE+F+R
Sbjct: 357 IPPKGLKMAATFVGNSTSIQEMFRR 381
Score = 156 bits (379), Expect = 1e-38
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
CFRTLKLSTP++GDLNHL+S TMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GF
Sbjct: 212 CFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 271
Query: 181 APLTSRGSRQYRALTVPELTQQMFEPR 261
APLTSRGS+QY +LTVPELTQQM++ +
Sbjct: 272 APLTSRGSQQYISLTVPELTQQMWDSK 298
Score = 105 bits (252), Expect = 3e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 655
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ+AT
Sbjct: 382 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAT 430
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 159 bits (386), Expect = 2e-39
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
CFRTLKL+ PT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GF
Sbjct: 211 CFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 181 APLTSRGSRQYRALTVPELTQQMFEPR 261
APLTSRGS+QY AL+VPELTQQM++ +
Sbjct: 271 APLTSRGSQQYSALSVPELTQQMWDAK 297
Score = 157 bits (380), Expect = 8e-39
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = +3
Query: 255 AKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 434
AKNMM A DPRHGRYLT +A+FRG++S KEVDEQM+NIQNKNSSYFVEWIPNNVK++VCD
Sbjct: 296 AKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCD 355
Query: 435 IPPRGLKMAATFIGNSTAIQELFKR 509
I P+GLKMA+TFIGNST+IQE+F+R
Sbjct: 356 IAPKGLKMASTFIGNSTSIQEMFRR 380
Score = 105 bits (252), Expect = 3e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 655
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ+AT
Sbjct: 381 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 159 bits (386), Expect = 2e-39
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
CFRTLKL+ PT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GF
Sbjct: 211 CFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 181 APLTSRGSRQYRALTVPELTQQMFEPR 261
APLTSRGS+QY AL+VPELTQQM++ +
Sbjct: 271 APLTSRGSQQYSALSVPELTQQMWDAK 297
Score = 156 bits (379), Expect = 1e-38
Identities = 68/85 (80%), Positives = 79/85 (92%)
Frame = +3
Query: 255 AKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 434
AKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCD
Sbjct: 296 AKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCD 355
Query: 435 IPPRGLKMAATFIGNSTAIQELFKR 509
I P GLKMA+TFIGNST+IQE+F+R
Sbjct: 356 IAPTGLKMASTFIGNSTSIQEMFRR 380
Score = 105 bits (252), Expect = 3e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 655
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ+AT
Sbjct: 381 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 157 bits (380), Expect = 8e-39
Identities = 67/85 (78%), Positives = 80/85 (94%)
Frame = +3
Query: 255 AKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 434
AKNMM A DPRHGRYLT +A+FRG+MS KEVDEQ+LN+QNKNSSYFVEWIPNNVK++VCD
Sbjct: 297 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCD 356
Query: 435 IPPRGLKMAATFIGNSTAIQELFKR 509
IPP G+KMA+TF+GNST+IQE+F+R
Sbjct: 357 IPPTGIKMASTFVGNSTSIQEMFRR 381
Score = 156 bits (379), Expect = 1e-38
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
CFRTLKLSTP++GDLNHL+S TMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GF
Sbjct: 212 CFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 271
Query: 181 APLTSRGSRQYRALTVPELTQQMFEPR 261
APLTSRGS+QY +LTVPELTQQM++ +
Sbjct: 272 APLTSRGSQQYISLTVPELTQQMWDAK 298
Score = 106 bits (255), Expect = 1e-23
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 655
+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+AT
Sbjct: 382 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 430
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 91.9 bits (218), Expect = 3e-19
Identities = 37/86 (43%), Positives = 56/86 (65%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
C R+L + PTY +LN L+S T+S +TT LRF G +N D+ + N+VP+PR+HF + +
Sbjct: 213 CRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 272
Query: 181 APLTSRGSRQYRALTVPELTQQMFEP 258
AP+ S + +VPE+T +FEP
Sbjct: 273 APVISSAKAYHEQFSVPEITTSVFEP 298
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +3
Query: 261 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 440
NMMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 300 NMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQP 359
Query: 441 P--------RGLKMAATFIGNSTAIQELFKR 509
P ++ A I N+TA+ E+F R
Sbjct: 360 PSVVPGGDLAKVQRAVCMISNNTAVAEVFSR 390
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 640
I +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 IDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/86 (43%), Positives = 56/86 (65%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
C R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF + +
Sbjct: 213 CRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 272
Query: 181 APLTSRGSRQYRALTVPELTQQMFEP 258
AP+ S + L+VPE+T +FEP
Sbjct: 273 APVISAAKAYHEQLSVPEITNAVFEP 298
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +3
Query: 261 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 440
+MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQP 359
Query: 441 P--------RGLKMAATFIGNSTAIQELFKR 509
P ++ A I N+TA+ E+F R
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNNTAVAEVFSR 390
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 640
I +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/86 (43%), Positives = 56/86 (65%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
C R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF + +
Sbjct: 213 CRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 272
Query: 181 APLTSRGSRQYRALTVPELTQQMFEP 258
AP+ S + L+VPE+T +FEP
Sbjct: 273 APVISAAKAYHEQLSVPEITNAVFEP 298
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +3
Query: 261 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 440
+MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQP 359
Query: 441 P--------RGLKMAATFIGNSTAIQELFKR 509
P ++ A I N+TA+ E+F R
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNNTAVAEVFSR 390
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 640
I +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 84.6 bits (200), Expect = 5e-17
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
C R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +
Sbjct: 213 CRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 181 APLTSRGSRQYRALTVPELTQQMFEP 258
AP+ S + L+V E+T FEP
Sbjct: 273 APVISAEKAFHEQLSVAEITNSAFEP 298
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +3
Query: 261 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 440
+MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQP 359
Query: 441 P--------RGLKMAATFIGNSTAIQELFKR 509
P ++ A I NST++ E+F R
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 390
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 640
I +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 84.6 bits (200), Expect = 5e-17
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
C R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +
Sbjct: 213 CRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 181 APLTSRGSRQYRALTVPELTQQMFEP 258
AP+ S + L+V E+T FEP
Sbjct: 273 APVISAEKAFHEQLSVAEITNSAFEP 298
Score = 57.2 bits (132), Expect = 9e-09
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Frame = +3
Query: 261 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 440
+MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQP 359
Query: 441 P--------RGLKMAATFIGNSTAIQE 497
P ++ A I NST++ E
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNSTSVAE 386
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 84.6 bits (200), Expect = 5e-17
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
C R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +
Sbjct: 213 CRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 181 APLTSRGSRQYRALTVPELTQQMFEP 258
AP+ S + L+V E+T FEP
Sbjct: 273 APVISAEKAFHEQLSVAEITNSAFEP 298
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +3
Query: 261 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 440
+MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQP 359
Query: 441 P--------RGLKMAATFIGNSTAIQELFKR 509
P ++ A I NST++ E+F R
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 390
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 640
I +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 84.6 bits (200), Expect = 5e-17
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +1
Query: 1 CFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 180
C R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +
Sbjct: 213 CRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 181 APLTSRGSRQYRALTVPELTQQMFEP 258
AP+ S + L+V E+T FEP
Sbjct: 273 APVISAEKAFHEQLSVAEITNSAFEP 298
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +3
Query: 261 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 440
+MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQP 359
Query: 441 P--------RGLKMAATFIGNSTAIQELFKR 509
P ++ A I NST++ E+F R
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 390
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 509 ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 640
I +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.5 bits (165), Expect = 9e-13
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 13 LKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 192
L L+ PT+ N LVS MS TT LR+PG +N DL L +++P PR HF M G+ PLT
Sbjct: 218 LHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLT 277
Query: 193 -SRGSRQYRALTVPELTQQMFEPR 261
R + R TV ++ +++ + +
Sbjct: 278 VERQANVIRKTTVLDVMRRLLQTK 301
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.5 bits (165), Expect = 9e-13
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 13 LKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 192
L L+ PT+ N LVS MS TT LR+PG +N DL L +++P PR HF M G+ PLT
Sbjct: 218 LHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLT 277
Query: 193 -SRGSRQYRALTVPELTQQMFEPR 261
R + R TV ++ +++ + +
Sbjct: 278 VERQANVIRKTTVLDVMRRLLQTK 301
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/95 (21%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Frame = +3
Query: 249 VRAKNMMAACDPRH-----GRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNN 413
++ KN+M + R+ +Y+++ I +G + +V E + I+ + F+EW P +
Sbjct: 298 LQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPAS 357
Query: 414 VKTAVCDIPP---RGLKMAATFIGNSTAIQELFKR 509
++ A+ P +++ + + T+I+ LF +
Sbjct: 358 IQVALSKKSPYVQTAHRVSGLMLASHTSIRHLFSK 392
>At4g19490.2 68417.m02867 expressed protein
Length = 1054
Score = 36.3 bits (80), Expect = 0.018
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Frame = +3
Query: 117 SQKIGRKHGSLPASPLLHARFRSPHIPWKQT--VPCLDCTRAHATDVRAKN---MMAACD 281
+Q+IG + GSL +SPL A ++P + K + ++ +R DV +N + AAC+
Sbjct: 535 AQEIGFQGGSLVSSPLGKATSKAPPLQGKSSDASSLMNMSRNFRADVLRENTEAVFAACE 594
Query: 282 PRHGRY---LTVAAIFRGRMSMKE 344
HGR+ L V A+ ++ ++E
Sbjct: 595 VTHGRWAKLLGVRALLHPKLKLQE 618
>At4g19490.1 68417.m02866 expressed protein
Length = 1054
Score = 36.3 bits (80), Expect = 0.018
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Frame = +3
Query: 117 SQKIGRKHGSLPASPLLHARFRSPHIPWKQT--VPCLDCTRAHATDVRAKN---MMAACD 281
+Q+IG + GSL +SPL A ++P + K + ++ +R DV +N + AAC+
Sbjct: 535 AQEIGFQGGSLVSSPLGKATSKAPPLQGKSSDASSLMNMSRNFRADVLRENTEAVFAACE 594
Query: 282 PRHGRY---LTVAAIFRGRMSMKE 344
HGR+ L V A+ ++ ++E
Sbjct: 595 VTHGRWAKLLGVRALLHPKLKLQE 618
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 99 RSVER*SQKIGRKHGSLPASPLLHARFRSPHIPWKQTVPCLD 224
+ VER QKI RK S LL + R P W ++ P L+
Sbjct: 588 QEVERVRQKIRRKEASSSYQALLVEKIRDPEASWTESKPILE 629
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 22 STPTYGDLNHLVSLTMSGVTTCLRFPG-QLN---ADLRKLAVNMVPFPRLHFFMPGFAPL 189
S PT +L LVSL + G + RFP N DL + + VP+ +FF L
Sbjct: 849 SLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFF--NLTKL 906
Query: 190 TSRGSRQYRALTV 228
T +G R+ + +++
Sbjct: 907 TMKGCRELKCVSL 919
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 22 STPTYGDLNHLVSLTMSGVTTCLRFPG-QLN---ADLRKLAVNMVPFPRLHFFMPGFAPL 189
S PT +L LVSL + G + RFP N DL + + VP+ +FF L
Sbjct: 810 SLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFF--NLTKL 867
Query: 190 TSRGSRQYRALTV 228
T +G R+ + +++
Sbjct: 868 TMKGCRELKCVSL 880
>At5g38600.1 68418.m04669 proline-rich spliceosome-associated (PSP)
family protein / zinc knuckle (CCHC-type) family protein
contains Pfam domains PF00098: Zinc knuckle, PF04046:
PSP
Length = 532
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 258 WLEHLLRELGYSQGTVLSASTGCEGSETWHEEVETRE 148
WL + RE+GY G + G + EEVETRE
Sbjct: 324 WLNRM-REIGYPPGYLAPEDDHLSGITIFGEEVETRE 359
>At1g33100.1 68414.m04087 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 475
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 240 ATDVRAKNMMAACDPRHGRYLTVAAIFRGRMS 335
A VR N + + +P+ ++ T+ A+F GR+S
Sbjct: 315 AVSVRVSNELGSGNPKGAKFATLIAVFTGRIS 346
>At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ
boundaries domain protein 30 (LBD30) identical to LOB
DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported
by full-length cDNA gi:16660631
Length = 228
Score = 28.7 bits (61), Expect = 3.6
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +1
Query: 1 CFRT-LKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 177
CF +L P YG ++H+VSL V+ +L+ LA +P P+ P
Sbjct: 79 CFEAQARLRDPIYGCVSHIVSLQQQVVS----LQTELSYLQAHLATLELPQPQ-----PP 129
Query: 178 FAPLTSRGSRQYRALT-VPELTQQMFEPRT*WPPV 279
P++S GS Q ++T +P ++ +++ + + PV
Sbjct: 130 QVPVSSSGSLQALSITDLPTISPSVYDLSSIFEPV 164
>At1g26890.1 68414.m03279 hypothetical protein
Length = 280
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 10 TLKLSTPTYGDLNHLVSLTMSG-VTTCLRFPGQLNADLRKLAVNMVPFPRLHF 165
TL L Y D LVSL S V CL+ + +L K V + +LH+
Sbjct: 110 TLSLRFVVYKDEESLVSLLSSSPVLNCLKVDRHKDDNLTKFTVKVSTLKQLHY 162
>At5g18475.1 68418.m02177 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 506
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 383 LILRGMDPQQREDRRVRHSPSWSQDGRHLHRKLHR 487
+ILRG+ + R + ++ W +G HL++ +R
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYR 412
>At1g35110.1 68414.m04352 Ulp1 protease family protein similar to
At5g28170, At1g44880, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1311
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 142 VPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFEP 258
V F R GF PL+SR RQ ++L VP +Q P
Sbjct: 581 VTFKRSRNLAFGFVPLSSRSKRQ-KSLEVPTQSQSSENP 618
>At1g29300.1 68414.m03582 expressed protein contains Pfam profile
PF04859: Plant protein of unknown function (DUF641
Length = 459
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -1
Query: 258 WLEHLLRELGYSQGTVLSASTGCEGSETWHEEVETREGNHVYGQFSEISVQLTGEP 91
WL H L TV GC S+ + E V++ + + G S+I V T P
Sbjct: 381 WLLHCLAFSLSGNVTVFQLKRGCRFSQVYMESVKSGDESLFSGDNSDIRVGFTVVP 436
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,510,500
Number of Sequences: 28952
Number of extensions: 291254
Number of successful extensions: 1005
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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