Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0851.Seq
(703 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0599 + 34984869-34985319,34986581-34987563 35 0.072
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 32 0.51
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 31 0.89
12_01_0541 + 4251931-4254141 25 1.1
08_02_1172 + 24898290-24899141,24900864-24901328 30 1.5
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 30 1.5
07_03_1623 - 28196981-28197532,28197667-28198058,28198472-281986... 30 2.0
01_01_1063 - 8386813-8387236,8387322-8387779 30 2.0
04_04_1354 - 32841778-32841983,32842079-32843093,32843184-328435... 29 2.7
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 29 4.7
07_01_0914 - 7693305-7693513,7693613-7694111,7694716-7696316,769... 29 4.7
05_04_0154 - 18549806-18550161,18550271-18550907 29 4.7
02_05_0136 + 26174965-26175849,26176965-26177030,26177124-261772... 29 4.7
01_06_1217 + 35485182-35485949 29 4.7
01_05_0421 + 21990034-21990392,21991691-21992681 29 4.7
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 29 4.7
02_03_0362 + 18158975-18159337 28 6.2
12_02_0848 + 23636478-23638058 28 8.3
08_01_0351 + 3095639-3095995,3096134-3096187,3096407-3096490,309... 28 8.3
07_03_0987 - 23155134-23155693,23155781-23157023 28 8.3
07_01_0070 + 515247-515397,516198-516265,516360-518456,518750-51... 28 8.3
01_06_1056 + 34139467-34140013,34141437-34142338 28 8.3
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 8.3
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 414 LPHGADSAMAEYDRCHRAVLSQGGQWPTALSAGDHAA 304
LP G +A+A Y+ H A S GG+W L+ GD +A
Sbjct: 228 LPAGLANAVAAYEVHHAASRSDGGRWYAVLAVGDPSA 264
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 226 PVCPIIPG*RPAGSHHHHEFPPP 158
PV +P RPA HHH PPP
Sbjct: 220 PVATTLPVIRPAALRHHHHHPPP 242
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 208 PG*RPAGSHHHHEFPP-PARAASTGPSIVQDHQSLAGRSRRHDDP 77
P P+ S HHH PP P+ +A + PSI D + S RHD P
Sbjct: 118 PSISPSSSFHHHPEPPSPSPSAPSYPSIA-DGLANMHVSDRHDYP 161
>12_01_0541 + 4251931-4254141
Length = 736
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 184 HHHHEFPPPARAA 146
HHHH PPP A
Sbjct: 358 HHHHHSPPPGGGA 370
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 196 PAGSHHHHEFPPP 158
PA HHHH PP
Sbjct: 353 PALLHHHHHHSPP 365
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 190 GSHHHHEFPPPARAASTGPSIVQDHQS 110
G+HHHH++PP A P + Q HQ+
Sbjct: 59 GAHHHHQYPP--AAFFHPPPVHQQHQA 83
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 263 AMEMPCTKSPPCACLPDYPWIAPCRIAPPS 174
A EMP P A P P +PCR +PP+
Sbjct: 199 AYEMPAPPPPHAASSPPLPSSSPCRRSPPA 228
>07_03_1623 -
28196981-28197532,28197667-28198058,28198472-28198661,
28198773-28198972,28199733-28199838
Length = 479
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 533 SGTCSHLPKGKTHDVLTGSDDGRHSNTSLAW 625
S TC PK K H T D +H+ SL W
Sbjct: 370 SRTCPSTPKAKAHRRTTSVPDAQHAADSLNW 400
>01_01_1063 - 8386813-8387236,8387322-8387779
Length = 293
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 229 APVCPIIPG*RPAGSHHHHEFPPPARAASTGPS 131
AP + P P G H H PPP AA+T PS
Sbjct: 234 APHPGMPPPPMPYGPHPHPHQPPPPAAAATAPS 266
>04_04_1354 - 32841778-32841983,32842079-32843093,32843184-32843518,
32843590-32844019,32844155-32844214,32844531-32844651,
32845321-32846132
Length = 992
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -1
Query: 229 APVCPIIPG*RPAGSHHHHEFPPPARAASTGPS 131
AP P P P HHHH + P R S GPS
Sbjct: 934 APPGPWRPVLHPGQEHHHHHYGHPGR--SNGPS 964
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/83 (28%), Positives = 29/83 (34%)
Frame = -1
Query: 298 TACSIGTT*ATVPWKCPVRNRLHAPVCPIIPG*RPAGSHHHHEFPPPARAASTGPSIVQD 119
T S + A+ P P RL+A P R A HHHH P + G
Sbjct: 10 TTSSSSASSASAP--APSAARLNAAAPEFTP--RSAAHHHHHHANPRRQHRGGGGGAYHH 65
Query: 118 HQSLAGRSRRHDDPRHFGGCHHH 50
HQ +H P H H H
Sbjct: 66 HQ-------QHYQPHHHHQHHQH 81
>07_01_0914 -
7693305-7693513,7693613-7694111,7694716-7696316,
7696509-7696530
Length = 776
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 222 TGAWRRFRTGHFHGTVAQVVPMLHAVNTQHGLQRI 326
+GAW + FHG +P L A + HGL+ I
Sbjct: 742 SGAWENSQFKEFHGNNPVTLPKLPADVSAHGLKHI 776
>05_04_0154 - 18549806-18550161,18550271-18550907
Length = 330
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 685 KRRPVNCNTTHYRANWVPGSPRQRRVAVATVITSGQHVVRFP 560
K R +C TH R+ WVP + R+ R +A +S FP
Sbjct: 130 KSRGFDC-PTHVRSTWVPAARRRERQQLAGAASSPPTSSAFP 170
>02_05_0136 +
26174965-26175849,26176965-26177030,26177124-26177258,
26177369-26177434,26177516-26177701,26177777-26177863,
26177985-26178098,26178174-26178298,26178375-26178483,
26179298-26179423,26179511-26179831,26180146-26180269,
26180405-26180529
Length = 822
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 267 VAQVVPMLHAVNTQHGL-QRIGPSAIARLGIKRLDDSGHILPW 392
+ + M + ++GL QRIGP ++A L LD+SG PW
Sbjct: 695 IRRATDMAYKAVAEYGLNQRIGPISVATLSNGGLDESGG-SPW 736
>01_06_1217 + 35485182-35485949
Length = 255
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 517 FIRAHPRGTS*AINSPSPIVNSALSAVRPEKRFSSPA 407
+++ P S A SPSP A +A P FSSP+
Sbjct: 5 WVKTRPSSPSSAAASPSPSTALAAAAASPRLSFSSPS 41
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = -1
Query: 211 IPG*RPAGSHHHHEFPPPARAASTGPSIVQDHQSLAGRSRRHDDPRH 71
IP A HHHH + + P ++ HQ LA + H
Sbjct: 145 IPAAMAAPGHHHHHHHHHHQLLFSPPPVMAHHQELAALQEQQQQQHH 191
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 154 RAASTGPSIVQDHQSLAGRSRRHDDPRHFGG 62
R A G + + S + R RHDD RH GG
Sbjct: 46 RRALRGTDVRSNTSSSSSRKGRHDDARHDGG 76
>02_03_0362 + 18158975-18159337
Length = 120
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 193 AGSHHHHEFPPPARAASTG 137
A HHHH PPP+ A G
Sbjct: 98 ARGHHHHHNPPPSSAPGRG 116
>12_02_0848 + 23636478-23638058
Length = 526
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = +2
Query: 230 MEAISYRAFPWHRRSGCTNAACSEYAAWSPADRAVGHCPPWDKTAR*QRSYSAMAESAPC 409
M A+ A PWHRR+ + + W P+D W + AR R A A
Sbjct: 270 MTALVIEASPWHRRTDVAVPYPTYFHPWRPSD-----VSSWQRDARRARRPWLFA-FAGA 323
Query: 410 GRG 418
GRG
Sbjct: 324 GRG 326
>08_01_0351 +
3095639-3095995,3096134-3096187,3096407-3096490,
3096972-3097097,3097174-3097241,3097324-3097393,
3097597-3097662,3098404-3098454
Length = 291
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 227 RMEAISYRAFPWHRRSGCTNAACSEYAAWSPADRA 331
R A++ PWHRR C++++ S AA + A A
Sbjct: 55 RALALTASTCPWHRRHLCSSSSSSSSAAAAAATAA 89
>07_03_0987 - 23155134-23155693,23155781-23157023
Length = 600
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 548 HLPKGKTHDVLTGSDDGRHSNTSLAWGARYPI 643
+LP G +L GS+ G SL W AR I
Sbjct: 400 YLPNGSLQSLLHGSNGGGGGGRSLDWAARKAI 431
>07_01_0070 +
515247-515397,516198-516265,516360-518456,518750-518900,
519883-520638,520990-521164,521303-521387
Length = 1160
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 196 PAGSHH-HHEFPPPARAASTGPSIVQD 119
P +HH H+ PPA A S+ PS+ ++
Sbjct: 37 PLAAHHSHNRLLPPAHALSSSPSVGEE 63
>01_06_1056 + 34139467-34140013,34141437-34142338
Length = 482
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = -1
Query: 265 VPWKCPVRNRLHAPVCPIIPG*RPAGSHHHHEFPPPARAASTGPSIVQDHQSLAGRSRRH 86
VPW V NR PVC + P S ++H P+ A HQ +AG + +
Sbjct: 131 VPWVVDVGNRRGVPVCSLFPMAAVFFSAYYHFDSLPSWLAK------PPHQPVAGATTDN 184
Query: 85 DDPR 74
D R
Sbjct: 185 PDQR 188
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 311 MLRIHCMQHWYNLSDGAMEMPCTKSPPC 228
+L +HC+Q W + S A P P C
Sbjct: 132 LLHLHCIQSWAHQSSSAAPSPTWGCPKC 159
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,082,570
Number of Sequences: 37544
Number of extensions: 623838
Number of successful extensions: 2316
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2281
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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