Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0847X.Seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC039654-1|AAH39654.1| 623|Homo sapiens TBCD protein protein. 64 3e-10
BC003094-1|AAH03094.1| 1192|Homo sapiens tubulin folding cofacto... 64 3e-10
AL133562-1|CAB63716.1| 1050|Homo sapiens hypothetical protein pr... 64 3e-10
AB023205-1|BAA76832.2| 1210|Homo sapiens KIAA0988 protein protein. 64 3e-10
AJ006417-1|CAA07022.1| 1248|Homo sapiens beta-tubulin cofactor D... 64 3e-10
BC012824-1|AAH12824.2| 387|Homo sapiens TBCD protein protein. 62 8e-10
BC109262-1|AAI09263.1| 507|Homo sapiens BTB (POZ) domain contai... 29 6.8
BC109261-1|AAI09262.1| 507|Homo sapiens BTB (POZ) domain contai... 29 6.8
AL135793-8|CAI95133.1| 506|Homo sapiens novel protein protein. 29 6.8
AK058088-1|BAB71658.1| 506|Homo sapiens protein ( Homo sapiens ... 29 6.8
>BC039654-1|AAH39654.1| 623|Homo sapiens TBCD protein protein.
Length = 623
Score = 64.1 bits (149), Expect = 3e-10
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +1
Query: 1 VIRSLIECTKVTEATQKWAEARRDAVIGLTEVCQXQGVRGGID------EHVDDVVAALL 162
V+ L T + +AE+RRD + + +CQ GV+ G E+V + ALL
Sbjct: 225 VLTGLRAVTHTSPEDVSFAESRRDGLKAIARICQTVGVKAGAPDEAVCGENVSQIYCALL 284
Query: 163 ECLAEYTIDMMGDIGAWVREASMSGL----LAICRSVPKKPRS*TLHKLSET*CVASRTC 330
C+ +YT D GD+G WVR+A+M+ L L + RS P+ + T ++ CVA +
Sbjct: 285 GCMDDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHTCERI--MCCVAQQAS 342
Query: 331 RR 336
+
Sbjct: 343 EK 344
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +2
Query: 329 AVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEV 460
A EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V
Sbjct: 341 ASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDV 385
>BC003094-1|AAH03094.1| 1192|Homo sapiens tubulin folding cofactor D
protein.
Length = 1192
Score = 64.1 bits (149), Expect = 3e-10
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +1
Query: 1 VIRSLIECTKVTEATQKWAEARRDAVIGLTEVCQXQGVRGGID------EHVDDVVAALL 162
V+ L T + +AE+RRD + + +CQ GV+ G E+V + ALL
Sbjct: 794 VLTGLRAVTHTSPEDVSFAESRRDGLKAIARICQTVGVKAGAPDEAVCGENVSQIYCALL 853
Query: 163 ECLAEYTIDMMGDIGAWVREASMSGL----LAICRSVPKKPRS*TLHKLSET*CVASRTC 330
C+ +YT D GD+G WVR+A+M+ L L + RS P+ + T ++ CVA +
Sbjct: 854 GCMDDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHTCERI--MCCVAQQAS 911
Query: 331 RR 336
+
Sbjct: 912 EK 913
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +2
Query: 329 AVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEV 460
A EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V
Sbjct: 910 ASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDV 954
>AL133562-1|CAB63716.1| 1050|Homo sapiens hypothetical protein
protein.
Length = 1050
Score = 64.1 bits (149), Expect = 3e-10
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +1
Query: 1 VIRSLIECTKVTEATQKWAEARRDAVIGLTEVCQXQGVRGGID------EHVDDVVAALL 162
V+ L T + +AE+RRD + + +CQ GV+ G E+V + ALL
Sbjct: 652 VLTGLRAVTHTSPEDVSFAESRRDGLKAIARICQTVGVKAGAPDEAVCGENVSQIYCALL 711
Query: 163 ECLAEYTIDMMGDIGAWVREASMSGL----LAICRSVPKKPRS*TLHKLSET*CVASRTC 330
C+ +YT D GD+G WVR+A+M+ L L + RS P+ + T ++ CVA +
Sbjct: 712 GCMDDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHTCERI--MCCVAQQAS 769
Query: 331 RR 336
+
Sbjct: 770 EK 771
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +2
Query: 329 AVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEV 460
A EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V
Sbjct: 768 ASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDV 812
>AB023205-1|BAA76832.2| 1210|Homo sapiens KIAA0988 protein protein.
Length = 1210
Score = 64.1 bits (149), Expect = 3e-10
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +1
Query: 1 VIRSLIECTKVTEATQKWAEARRDAVIGLTEVCQXQGVRGGID------EHVDDVVAALL 162
V+ L T + +AE+RRD + + +CQ GV+ G E+V + ALL
Sbjct: 812 VLTGLRAVTHTSPEDVSFAESRRDGLKAIARICQTVGVKAGAPDEAVCGENVSQIYCALL 871
Query: 163 ECLAEYTIDMMGDIGAWVREASMSGL----LAICRSVPKKPRS*TLHKLSET*CVASRTC 330
C+ +YT D GD+G WVR+A+M+ L L + RS P+ + T ++ CVA +
Sbjct: 872 GCMDDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHTCERI--MCCVAQQAS 929
Query: 331 RR 336
+
Sbjct: 930 EK 931
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +2
Query: 329 AVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEV 460
A EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V
Sbjct: 928 ASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDV 972
>AJ006417-1|CAA07022.1| 1248|Homo sapiens beta-tubulin cofactor D
protein.
Length = 1248
Score = 63.7 bits (148), Expect = 3e-10
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +1
Query: 1 VIRSLIECTKVTEATQKWAEARRDAVIGLTEVCQXQGVRGGID------EHVDDVVAALL 162
V+ L T + +AE+RRD + + +CQ GV+ G E+V + ALL
Sbjct: 794 VLTGLGALTHTSPEDVSFAESRRDGLKAIARICQTVGVKAGAPDEAVCGENVSQIYCALL 853
Query: 163 ECLAEYTIDMMGDIGAWVREASMSGL----LAICRSVPKKPRS*TLHKLSET*CVASRTC 330
C+ +YT D GD+G WVR+A+M+ L L + RS P+ + T ++ CVA +
Sbjct: 854 GCMDDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHTCERI--MCCVAQQAS 911
Query: 331 RR 336
+
Sbjct: 912 EK 913
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +2
Query: 329 AVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEV 460
A EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V
Sbjct: 910 ASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDV 954
>BC012824-1|AAH12824.2| 387|Homo sapiens TBCD protein protein.
Length = 387
Score = 62.5 bits (145), Expect = 8e-10
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Frame = +1
Query: 52 WAEARRDAVIGLTEVCQXQGVRGGID------EHVDDVVAALLECLAEYTIDMMGDIGAW 213
+AE+RRD + + +CQ GV+ G E+V + ALL C+ +YT D GD+G W
Sbjct: 6 FAESRRDGLKAIARICQTVGVKAGAPDEAVCGENVSQIYCALLGCMDDYTTDSRGDVGTW 65
Query: 214 VREASMSGL----LAICRSVPKKPRS*TLHKLSET*CVASRTCRR 336
VR+A+M+ L L + RS P+ + T ++ CVA + +
Sbjct: 66 VRKAAMTSLMDLTLLLARSQPELIEAHTCERI--MCCVAQQASEK 108
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +2
Query: 329 AVEKIDRTRAHAGRIFTSLIYND-PPISNIPHHEALKRIFPSEEV 460
A EKIDR RAHA +F +L++ D PPI ++PH L+++FP +V
Sbjct: 105 ASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDV 149
>BC109262-1|AAI09263.1| 507|Homo sapiens BTB (POZ) domain
containing 16 protein.
Length = 507
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 320 RAHAVEKIDRTRAHAGRIFTSLIYNDPPISNIPHHEALKRIFPSE-EVELK 469
RA + +K + ++ A RI SL NDP ++ + ALK ++ SE E+ L+
Sbjct: 129 RAQSPKKT-KEKSPAKRIIISLKINDPLVTKVAFATALKNLYMSEVEINLE 178
>BC109261-1|AAI09262.1| 507|Homo sapiens BTB (POZ) domain
containing 16 protein.
Length = 507
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 320 RAHAVEKIDRTRAHAGRIFTSLIYNDPPISNIPHHEALKRIFPSE-EVELK 469
RA + +K + ++ A RI SL NDP ++ + ALK ++ SE E+ L+
Sbjct: 129 RAQSPKKT-KEKSPAKRIIISLKINDPLVTKVAFATALKNLYMSEVEINLE 178
>AL135793-8|CAI95133.1| 506|Homo sapiens novel protein protein.
Length = 506
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 320 RAHAVEKIDRTRAHAGRIFTSLIYNDPPISNIPHHEALKRIFPSE-EVELK 469
RA + +K + ++ A RI SL NDP ++ + ALK ++ SE E+ L+
Sbjct: 128 RAQSPKKT-KEKSPAKRIIISLKINDPLVTKVAFATALKNLYMSEVEINLE 177
>AK058088-1|BAB71658.1| 506|Homo sapiens protein ( Homo sapiens
cDNA FLJ25359 fis, clone TST01707. ).
Length = 506
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 320 RAHAVEKIDRTRAHAGRIFTSLIYNDPPISNIPHHEALKRIFPSE-EVELK 469
RA + +K + ++ A RI SL NDP ++ + ALK ++ SE E+ L+
Sbjct: 128 RAQSPKKT-KEKSPAKRIIISLKINDPLVTKVAFATALKNLYMSEVEINLE 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,284,166
Number of Sequences: 237096
Number of extensions: 1470962
Number of successful extensions: 4195
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4183
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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