Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0847X.Seq
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    22   3.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   3.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.4  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.4  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    21   9.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   9.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.4  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 294 IIRDVMCGVAHMPSRKLTEPEPTRD 368
           I+  + C VA++ ++   EPE T D
Sbjct: 4   IVLVLFCAVAYVSAQAELEPEDTMD 28


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 244 RVDLTYWLPGPKRLCRPS 191
           +V   YWLP   R+ RPS
Sbjct: 333 KVVFLYWLPCILRMSRPS 350


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 399 GSLYMRDVNIRPAWALVRSIFSTACARRHTSR 304
           GS++ RDVN+R   A+V   + T   + +  R
Sbjct: 88  GSVHSRDVNVR---AVVAQYYDTDVNKEYAIR 116


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 278 LRGFFGTLRHIASRP 234
           +  F GT+ H+ SRP
Sbjct: 108 IENFKGTVTHVESRP 122


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 122 PPRTPCXWHTSVS 84
           P RTP  W  SVS
Sbjct: 415 PARTPFQWDDSVS 427


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 419 HHEALKRIFPSEEV 460
           HHEAL+   P + V
Sbjct: 238 HHEALQEAVPGDNV 251


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 419 HHEALKRIFPSEEV 460
           HHEAL+   P + V
Sbjct: 295 HHEALQEAVPGDNV 308


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 122 PPRTPCXWHTSVS 84
           P RTP  W  SVS
Sbjct: 415 PARTPFQWDDSVS 427


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 380 SLIYNDPPISNIPHHEALKRIFPSEEVELK 469
           S     P +SN    E   R  PS+  ++K
Sbjct: 240 SFFSTSPELSNKQRFEYFTRTIPSDHYQVK 269


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,383
Number of Sequences: 438
Number of extensions: 2928
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)