Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0845.Seq
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -3

Query: 647 VINVPPRNSQLPRSA--SIAAAEKHANPRVVPSRAVIMIDGSTTLTYST 507
           V+N+   ++ + R++  S+          V+ +R V+  DGS T  YS+
Sbjct: 545 VVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSS 593


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -3

Query: 647 VINVPPRNSQLPRSA--SIAAAEKHANPRVVPSRAVIMIDGSTTLTYST 507
           V+N+   ++ + R++  S+          V+ +R V+  DGS T  YS+
Sbjct: 545 VVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSS 593


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
 Frame = +1

Query: 457 RLSTWIWINIRHEHGSPVE----YVSVVDPSIIITALLGTTLGFAC 582
           R + W W    HE  +P E     VS V P      + GT   F+C
Sbjct: 26  RPAWWFWTATSHEASAPAEGKFKTVSKV-PGPFSLPIFGTRWIFSC 70


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 507 RGPMLMPDVNPN 472
           RGPM   D NPN
Sbjct: 856 RGPMTNDDFNPN 867


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,654
Number of Sequences: 438
Number of extensions: 3883
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)