Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0844x.Seq
         (484 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC045673-1|AAH45673.1|  413|Homo sapiens HAT1 protein protein.         65   1e-10
AF030424-1|AAC02425.1|  419|Homo sapiens histone acetyltransfera...    65   1e-10
AC015976-1|AAY14731.1|  381|Homo sapiens unknown protein.              55   1e-07
AY847597-1|AAW32540.1|  664|Homo sapiens lamin A/C transcript va...    29   8.6  

>BC045673-1|AAH45673.1|  413|Homo sapiens HAT1 protein protein.
          Length = 413

 Score = 65.3 bits (152), Expect = 1e-10
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = +3

Query: 315 NDVLEFKLVRSVDDLENEETSFGPDMCHQVFGENENIFGYTDLHIKLYYSAGSLQT 482
           N  +E KLVR  +DLEN+  +F P+  HQ+FG++E  FGY  L I LYY AGSL T
Sbjct: 24  NTAIELKLVRFPEDLENDIRTFFPEYTHQLFGDDETAFGYKGLKILLYYIAGSLST 79


>AF030424-1|AAC02425.1|  419|Homo sapiens histone acetyltransferase
           1 protein.
          Length = 419

 Score = 65.3 bits (152), Expect = 1e-10
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = +3

Query: 315 NDVLEFKLVRSVDDLENEETSFGPDMCHQVFGENENIFGYTDLHIKLYYSAGSLQT 482
           N  +E KLVR  +DLEN+  +F P+  HQ+FG++E  FGY  L I LYY AGSL T
Sbjct: 30  NTAIELKLVRFPEDLENDIRTFFPEYTHQLFGDDETAFGYKGLKILLYYIAGSLST 85


>AC015976-1|AAY14731.1|  381|Homo sapiens unknown protein.
          Length = 381

 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = +3

Query: 342 RSVDDLENEETSFGPDMCHQVFGENENIFGYTDLHIKLYYSAGSLQT 482
           R  +DLEN+  +F P+  HQ+FG++E  FGY  L I LYY AGSL T
Sbjct: 1   RFPEDLENDIRTFFPEYTHQLFGDDETAFGYKGLKILLYYIAGSLST 47


>AY847597-1|AAW32540.1|  664|Homo sapiens lamin A/C transcript
           variant 1 protein.
          Length = 664

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 312 GNDVLEFKLVRSVDDLENEETSFGPDMCHQVFGEN 416
           G +V   KLVRSV  +E++E   G D+ H   G +
Sbjct: 535 GEEVAMSKLVRSVTVVEDDEDEDGDDLLHHHHGSH 569


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,569,783
Number of Sequences: 237096
Number of extensions: 1429768
Number of successful extensions: 2008
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2008
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)