Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0844x.Seq
         (484 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49128-4|CAA88954.1|  541|Caenorhabditis elegans Hypothetical pr...    42   3e-04
AF026215-4|AAB71322.1|  843|Caenorhabditis elegans Hypothetical ...    35   0.036
Z79694-3|CAB01962.3|  594|Caenorhabditis elegans Hypothetical pr...    32   0.25 
AY387697-1|AAR26326.1|  594|Caenorhabditis elegans SOL-1 protein.      32   0.25 
U41105-10|AAA82404.1|  238|Caenorhabditis elegans Hypothetical p...    29   2.3  
AC006791-5|AAF60739.1|  330|Caenorhabditis elegans Hypothetical ...    28   4.1  
Z47358-9|CAA87434.3|  436|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z50029-1|CAA90340.2|  460|Caenorhabditis elegans Hypothetical pr...    27   7.1  
U97191-3|AAB52430.2|  133|Caenorhabditis elegans Hypothetical pr...    27   7.1  

>Z49128-4|CAA88954.1|  541|Caenorhabditis elegans Hypothetical
           protein M03C11.4 protein.
          Length = 541

 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 17/58 (29%), Positives = 36/58 (62%)
 Frame = +3

Query: 303 VVDGNDVLEFKLVRSVDDLENEETSFGPDMCHQVFGENENIFGYTDLHIKLYYSAGSL 476
           + DG  V++   ++++ ++      + P+M +Q FG+ E IFGY DL + ++++A +L
Sbjct: 146 ISDGLAVVKMTFLKNMQEISTAPR-YEPEMVYQHFGDEETIFGYEDLEVTIHHTAQTL 202


>AF026215-4|AAB71322.1|  843|Caenorhabditis elegans Hypothetical
           protein F09G2.4 protein.
          Length = 843

 Score = 34.7 bits (76), Expect = 0.036
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 230 KIYAGIAPENPLL-ILQND*CFVPLSC*WERRFGIQTSE 343
           K+++G   E PL  +LQ D  ++ L C W+ RFG+Q  E
Sbjct: 8   KVFSGAKDEGPLCYLLQVDGDYILLDCGWDERFGLQYFE 46


>Z79694-3|CAB01962.3|  594|Caenorhabditis elegans Hypothetical
           protein C15A11.3 protein.
          Length = 594

 Score = 31.9 bits (69), Expect = 0.25
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 266 TTDFPEQFPRKFYCQYFFNIAKMEVCNLHF 177
           + ++P  +PR  YC+Y F+    +V ++HF
Sbjct: 451 SANYPGLYPRNLYCEYIFHGRNDQVVHIHF 480


>AY387697-1|AAR26326.1|  594|Caenorhabditis elegans SOL-1 protein.
          Length = 594

 Score = 31.9 bits (69), Expect = 0.25
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 266 TTDFPEQFPRKFYCQYFFNIAKMEVCNLHF 177
           + ++P  +PR  YC+Y F+    +V ++HF
Sbjct: 451 SANYPGLYPRNLYCEYIFHGRNDQVVHIHF 480


>U41105-10|AAA82404.1|  238|Caenorhabditis elegans Hypothetical
           protein T02G5.3 protein.
          Length = 238

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 400 RYLERMRIYLDIQIYTLNYITVQEVF 477
           +Y  R+R+YL   ++ LN+  + ++F
Sbjct: 192 KYQNRLRLYLGFCVFALNFFVIDQIF 217


>AC006791-5|AAF60739.1|  330|Caenorhabditis elegans Hypothetical
           protein Y4C6A.3 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 434 ISKYILILSKYLVTHVGTKACLFI-FEIIYRPH*FEF 327
           IS Y LIL    +TH+G   C++I   I++  + F F
Sbjct: 103 ISMYPLILMFLPITHIGVPVCIYIALHIVFALYYFLF 139


>Z47358-9|CAA87434.3|  436|Caenorhabditis elegans Hypothetical
           protein ZK1307.7 protein.
          Length = 436

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -3

Query: 377 ACLFIFEIIYRPH*FEFQNVVPINN*VAQSISHFVKLTTDFPEQFPRKFYCQYFF 213
           AC+FI  I   P  FEF+ VVP  N     ++    + ++F E  P K   +++F
Sbjct: 168 ACIFIAIIAKGPMYFEFE-VVPNAN--CTGVTSLTAIPSEFSESEPYKTAYKFWF 219


>Z50029-1|CAA90340.2|  460|Caenorhabditis elegans Hypothetical
           protein ZC504.1 protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 242 PRKFYCQYFFNIAKMEVCNLH 180
           P  ++CQY F I+    C+L+
Sbjct: 440 PMGYFCQYLFEISSFSCCSLY 460


>U97191-3|AAB52430.2|  133|Caenorhabditis elegans Hypothetical
           protein F53F10.3 protein.
          Length = 133

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = -1

Query: 457 YNLMCRS----VYPNIFSFSPNTW*HMSGPKLV 371
           Y  +C++    VYP + +F+   W H +GPK V
Sbjct: 8   YQALCKAGDKFVYPVLPAFAKPAWNHAAGPKTV 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,690,197
Number of Sequences: 27780
Number of extensions: 248155
Number of successful extensions: 485
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)