Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0843.Seq
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    32   0.004
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    25   0.75 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = -2

Query: 499  NNVFGHGVRLHFGFHLDIENLKCFLSFNTSFAFQSNDFTSWIHDSRVGTDWSSNWICWIC 320
            N +FGHG+ L FG    +     F +       Q ND+    +   V T +++N +C IC
Sbjct: 869  NEIFGHGLLLMFGISFLLVTQTIF-ALCVVLQLQENDWLQLGYLIFVSTLYTANVVC-IC 926

Query: 319  HI 314
            H+
Sbjct: 927  HV 928


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 236 QHSHHGTDKFIC 271
           QHSH  TDK IC
Sbjct: 17  QHSHGATDKVIC 28


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -3

Query: 168 ILAPCLLITPSYTNRKRKNGRP 103
           +  PC   TP       KNG+P
Sbjct: 381 VYIPCWNATPEIITYLEKNGKP 402


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 186 LETVSVILAPCLLITPSYTN 127
           LE  +V+ A C + TP+ TN
Sbjct: 127 LELYTVLGAACQVCTPNATN 146


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 186 LETVSVILAPCLLITPSYTN 127
           LE  +V+ A C + TP+ TN
Sbjct: 127 LELYTVLGAACQVCTPNATN 146


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -2

Query: 322 CHINNDNFCSLTNLLANTDKLVRSMVRVLKEIEAGLIPTFV 200
           C +N D +  L N     DK+ ++    +K  +A ++  F+
Sbjct: 97  CILNQDKWRLLNNNFQQIDKIFKTRDDRVKVYQAPVLQLFL 137


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 604 HSSLADCQIINYRTDPKQQWL 666
           H+SL +     +R   K QWL
Sbjct: 281 HNSLYELDFDTFRNTKKLQWL 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,570
Number of Sequences: 336
Number of extensions: 3536
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)