Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0843.Seq
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein. 140 5e-33
BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (... 140 5e-33
BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein. 140 5e-33
X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain poly... 132 8e-31
U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2 pr... 132 8e-31
U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2 pr... 132 8e-31
U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy cha... 132 8e-31
U33837-1|AAB41649.1| 4655|Homo sapiens gp330 precursor protein. 30 8.6
AY265358-1|AAP88586.1| 4655|Homo sapiens glycoprotein receptor g... 30 8.6
AY265357-1|AAP88585.1| 4655|Homo sapiens glycoprotein receptor g... 30 8.6
AC008178-1|AAY24266.1| 773|Homo sapiens unknown protein. 30 8.6
>D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein.
Length = 1685
Score = 140 bits (338), Expect = 5e-33
Identities = 69/85 (81%), Positives = 75/85 (88%)
Frame = +2
Query: 254 TDKFICVREKVGETAEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKT 433
+DKFIC+REKVGE A+VVIIDM DP+NPIRRPISADSAIMNPASKVIALK A KT
Sbjct: 44 SDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK------AGKT 97
Query: 434 LQIFNIEMKSKMKAHTMTEDIVFWK 508
LQIFNIEMKSKMKAHTMT+D+ FWK
Sbjct: 98 LQIFNIEMKSKMKAHTMTDDVTFWK 122
Score = 101 bits (242), Expect = 2e-21
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +1
Query: 499 FLEGISLNTLALVTKMSVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLL 672
F + ISLNT+ALVT +VYHWSMEG+S PVKMFDRHSSLA CQIINYRTD KQ+WLLL
Sbjct: 120 FWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLL 177
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTME 254
MAQ+LPIRFQEHLQL N+GINPA+I F+TLTME
Sbjct: 11 MAQILPIRFQEHLQLQNLGINPANIGFSTLTME 43
>BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (Hc)
protein.
Length = 1675
Score = 140 bits (338), Expect = 5e-33
Identities = 69/85 (81%), Positives = 75/85 (88%)
Frame = +2
Query: 254 TDKFICVREKVGETAEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKT 433
+DKFIC+REKVGE A+VVIIDM DP+NPIRRPISADSAIMNPASKVIALK A KT
Sbjct: 34 SDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK------AGKT 87
Query: 434 LQIFNIEMKSKMKAHTMTEDIVFWK 508
LQIFNIEMKSKMKAHTMT+D+ FWK
Sbjct: 88 LQIFNIEMKSKMKAHTMTDDVTFWK 112
Score = 101 bits (242), Expect = 2e-21
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +1
Query: 499 FLEGISLNTLALVTKMSVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLL 672
F + ISLNT+ALVT +VYHWSMEG+S PVKMFDRHSSLA CQIINYRTD KQ+WLLL
Sbjct: 110 FWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLL 167
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTME 254
MAQ+LPIRFQEHLQL N+GINPA+I F+TLTME
Sbjct: 1 MAQILPIRFQEHLQLQNLGINPANIGFSTLTME 33
>BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein.
Length = 1639
Score = 140 bits (338), Expect = 5e-33
Identities = 69/85 (81%), Positives = 75/85 (88%)
Frame = +2
Query: 254 TDKFICVREKVGETAEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKT 433
+DKFIC+REKVGE A+VVIIDM DP+NPIRRPISADSAIMNPASKVIALK A KT
Sbjct: 34 SDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK------AGKT 87
Query: 434 LQIFNIEMKSKMKAHTMTEDIVFWK 508
LQIFNIEMKSKMKAHTMT+D+ FWK
Sbjct: 88 LQIFNIEMKSKMKAHTMTDDVTFWK 112
Score = 101 bits (242), Expect = 2e-21
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +1
Query: 499 FLEGISLNTLALVTKMSVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLL 672
F + ISLNT+ALVT +VYHWSMEG+S PVKMFDRHSSLA CQIINYRTD KQ+WLLL
Sbjct: 110 FWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLL 167
Score = 61.7 bits (143), Expect = 2e-09
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTME 254
MAQ+LPIRFQEHLQL N+GINPA+I F+TLTME
Sbjct: 1 MAQILPIRFQEHLQLQNLGINPANIGFSTLTME 33
>X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain
polypeptide protein.
Length = 1640
Score = 132 bits (320), Expect = 8e-31
Identities = 65/85 (76%), Positives = 73/85 (85%)
Frame = +2
Query: 254 TDKFICVREKVGETAEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKT 433
+DKFIC+REKVGE A+V IIDM+DP PIRRPISA+SAIMNPASKVIALK A KT
Sbjct: 34 SDKFICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKT 87
Query: 434 LQIFNIEMKSKMKAHTMTEDIVFWK 508
LQIFNIEMKSKMKAHTM E+++FWK
Sbjct: 88 LQIFNIEMKSKMKAHTMAEEVIFWK 112
Score = 93.5 bits (222), Expect = 6e-19
Identities = 39/58 (67%), Positives = 50/58 (86%)
Frame = +1
Query: 499 FLEGISLNTLALVTKMSVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLL 672
F + +S+NT+ALVT+ +VYHWSMEGDS P+KMFDRH+SL CQ+I+YRTD Q+WLLL
Sbjct: 110 FWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVGCQVIHYRTDEYQKWLLL 167
Score = 59.7 bits (138), Expect = 9e-09
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTME 254
MAQ+LP+RFQEH QL N+GINPA+I F+TLTME
Sbjct: 1 MAQILPVRFQEHFQLQNLGINPANIGFSTLTME 33
>U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2
protein.
Length = 1569
Score = 132 bits (320), Expect = 8e-31
Identities = 65/85 (76%), Positives = 73/85 (85%)
Frame = +2
Query: 254 TDKFICVREKVGETAEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKT 433
+DKFIC+REKVGE A+V IIDM+DP PIRRPISA+SAIMNPASKVIALK A KT
Sbjct: 34 SDKFICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKT 87
Query: 434 LQIFNIEMKSKMKAHTMTEDIVFWK 508
LQIFNIEMKSKMKAHTM E+++FWK
Sbjct: 88 LQIFNIEMKSKMKAHTMAEEVIFWK 112
Score = 93.5 bits (222), Expect = 6e-19
Identities = 39/58 (67%), Positives = 50/58 (86%)
Frame = +1
Query: 499 FLEGISLNTLALVTKMSVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLL 672
F + +S+NT+ALVT+ +VYHWSMEGDS P+KMFDRH+SL CQ+I+YRTD Q+WLLL
Sbjct: 110 FWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVGCQVIHYRTDEYQKWLLL 167
Score = 59.7 bits (138), Expect = 9e-09
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTME 254
MAQ+LP+RFQEH QL N+GINPA+I F+TLTME
Sbjct: 1 MAQILPVRFQEHFQLQNLGINPANIGFSTLTME 33
>U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2
protein.
Length = 1626
Score = 132 bits (320), Expect = 8e-31
Identities = 65/85 (76%), Positives = 73/85 (85%)
Frame = +2
Query: 254 TDKFICVREKVGETAEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKT 433
+DKFIC+REKVGE A+V IIDM+DP PIRRPISA+SAIMNPASKVIALK A KT
Sbjct: 34 SDKFICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKT 87
Query: 434 LQIFNIEMKSKMKAHTMTEDIVFWK 508
LQIFNIEMKSKMKAHTM E+++FWK
Sbjct: 88 LQIFNIEMKSKMKAHTMAEEVIFWK 112
Score = 93.5 bits (222), Expect = 6e-19
Identities = 39/58 (67%), Positives = 50/58 (86%)
Frame = +1
Query: 499 FLEGISLNTLALVTKMSVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLL 672
F + +S+NT+ALVT+ +VYHWSMEGDS P+KMFDRH+SL CQ+I+YRTD Q+WLLL
Sbjct: 110 FWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVGCQVIHYRTDEYQKWLLL 167
Score = 59.7 bits (138), Expect = 9e-09
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTME 254
MAQ+LP+RFQEH QL N+GINPA+I F+TLTME
Sbjct: 1 MAQILPVRFQEHFQLQNLGINPANIGFSTLTME 33
>U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy chain
protein.
Length = 1640
Score = 132 bits (320), Expect = 8e-31
Identities = 65/85 (76%), Positives = 73/85 (85%)
Frame = +2
Query: 254 TDKFICVREKVGETAEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKT 433
+DKFIC+REKVGE A+V IIDM+DP PIRRPISA+SAIMNPASKVIALK A KT
Sbjct: 34 SDKFICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKT 87
Query: 434 LQIFNIEMKSKMKAHTMTEDIVFWK 508
LQIFNIEMKSKMKAHTM E+++FWK
Sbjct: 88 LQIFNIEMKSKMKAHTMAEEVIFWK 112
Score = 93.5 bits (222), Expect = 6e-19
Identities = 39/58 (67%), Positives = 50/58 (86%)
Frame = +1
Query: 499 FLEGISLNTLALVTKMSVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLL 672
F + +S+NT+ALVT+ +VYHWSMEGDS P+KMFDRH+SL CQ+I+YRTD Q+WLLL
Sbjct: 110 FWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVGCQVIHYRTDEYQKWLLL 167
Score = 59.7 bits (138), Expect = 9e-09
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTME 254
MAQ+LP+RFQEH QL N+GINPA+I F+TLTME
Sbjct: 1 MAQILPVRFQEHFQLQNLGINPANIGFSTLTME 33
>U33837-1|AAB41649.1| 4655|Homo sapiens gp330 precursor protein.
Length = 4655
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -2
Query: 532 ERVCSVKSLPENNVFGHGVRLHFGFHLDIENLKC-----FLSFNTSFAFQSNDFT 383
E+VC + +N+ G + FGF LD + C FL F++ A + FT
Sbjct: 671 EQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQNFLIFSSQVAIRGIPFT 725
>AY265358-1|AAP88586.1| 4655|Homo sapiens glycoprotein receptor
gp330/megalin precursor protein.
Length = 4655
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -2
Query: 532 ERVCSVKSLPENNVFGHGVRLHFGFHLDIENLKC-----FLSFNTSFAFQSNDFT 383
E+VC + +N+ G + FGF LD + C FL F++ A + FT
Sbjct: 671 EQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQNFLIFSSQVAIRGIPFT 725
>AY265357-1|AAP88585.1| 4655|Homo sapiens glycoprotein receptor
gp330/megalin precursor protein.
Length = 4655
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -2
Query: 532 ERVCSVKSLPENNVFGHGVRLHFGFHLDIENLKC-----FLSFNTSFAFQSNDFT 383
E+VC + +N+ G + FGF LD + C FL F++ A + FT
Sbjct: 671 EQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQNFLIFSSQVAIRGIPFT 725
>AC008178-1|AAY24266.1| 773|Homo sapiens unknown protein.
Length = 773
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -2
Query: 532 ERVCSVKSLPENNVFGHGVRLHFGFHLDIENLKC-----FLSFNTSFAFQSNDFT 383
E+VC + +N+ G + FGF LD + C FL F++ A + FT
Sbjct: 671 EQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQNFLIFSSQVAIRGIPFT 725
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,272,125
Number of Sequences: 237096
Number of extensions: 2027706
Number of successful extensions: 5068
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5061
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -