Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0842.Seq
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.5  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   3.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   5.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   5.8  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   5.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   5.8  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   7.6  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 52  CRILKWSQGLHPYRSS 99
           C+++K+ Q L PY SS
Sbjct: 113 CKVVKYGQTLGPYLSS 128


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +1

Query: 436 RPCAHHRRQIRRQVPPARQPRCSRLT 513
           +PC     +++R +P A +  C++ T
Sbjct: 53  KPCTPDGEELKRVLPDALKTSCAKCT 78


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -3

Query: 545 SPSGPSTASALVSRLHLGC 489
           SP G     AL   LH GC
Sbjct: 57  SPDGEELKKALPDALHSGC 75


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 439 PCAHHRRQIRRQVPPARQPRCSRLT 513
           PC      ++R +P A Q  C++ T
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCAKCT 76


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 439 PCAHHRRQIRRQVPPARQPRCSR 507
           PC+   R++++ +P A    CS+
Sbjct: 65  PCSPEGRELKKILPDALVTNCSK 87


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 597 LEPGSVLHRLGCPGPARLPFRP 532
           L+  ++ H+L   GP R P +P
Sbjct: 46  LQNAALYHKLQFRGPPRTPLQP 67


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/27 (29%), Positives = 9/27 (33%)
 Frame = +1

Query: 373 CDATRHSCLGFADDGGHRDRPRPCAHH 453
           CD    SC+      G    P  C  H
Sbjct: 15  CDDEVESCIAVGVGSGRNSAPSICGEH 41


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +1

Query: 439 PCAHHRRQIRRQVPPARQPRCSR 507
           PC    R++++ +P A    C++
Sbjct: 54  PCTSEGRELKKTLPDALSSGCTK 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,481
Number of Sequences: 336
Number of extensions: 4062
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)