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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0842.Seq
         (724 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117203-21|CAN86632.1|  171|Caenorhabditis elegans Hypothetical...    34   0.089
AL117203-20|CAB55118.1|  244|Caenorhabditis elegans Hypothetical...    34   0.089
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF087133-1|AAD14595.1|  728|Caenorhabditis elegans alternatively...    30   1.5  
AF087132-1|AAD14594.1|  792|Caenorhabditis elegans alternatively...    30   1.5  
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively...    30   1.5  
AF016688-5|AAB66073.1|  666|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF014940-4|AAB63936.2|  322|Caenorhabditis elegans Hypothetical ...    29   3.4  
U29082-7|AAA68404.3|  319|Caenorhabditis elegans Hypothetical pr...    29   4.4  
L23648-5|AAN63385.1|  381|Caenorhabditis elegans Cyclin t protei...    29   4.4  
L23648-4|AAA28033.2|  555|Caenorhabditis elegans Cyclin t protei...    29   4.4  
AF016437-1|AAB65884.2|  690|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z73978-2|CAA98292.2|  728|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>AL117203-21|CAN86632.1|  171|Caenorhabditis elegans Hypothetical
           protein Y48C3A.18b protein.
          Length = 171

 Score = 34.3 bits (75), Expect = 0.089
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 693 NQFRDIHQNVDLFFDSLGFGQSLPGESPLQLPLEPGSVLHRLGC 562
           + FRD+H N+DL  D+     S  G + + L +E G  + R GC
Sbjct: 82  DHFRDLHPNIDLILDAGSIISSGEGSTIVDLTVESGFRIVRSGC 125


>AL117203-20|CAB55118.1|  244|Caenorhabditis elegans Hypothetical
           protein Y48C3A.18a protein.
          Length = 244

 Score = 34.3 bits (75), Expect = 0.089
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 693 NQFRDIHQNVDLFFDSLGFGQSLPGESPLQLPLEPGSVLHRLGC 562
           + FRD+H N+DL  D+     S  G + + L +E G  + R GC
Sbjct: 155 DHFRDLHPNIDLILDAGSIISSGEGSTIVDLTVESGFRIVRSGC 198


>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
           protein ZC504.4d protein.
          Length = 1072

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +1

Query: 391 SCLGFADDGGHR--DRPRPCAHHRRQIRRQVPPARQPRCSRLTSADAVDGPEGETGRARA 564
           S  G AD   H    RPRP +HH+R  ++  P A  P  + L + +     E E  R R 
Sbjct: 397 SSRGAADGPRHSPASRPRPVSHHQRSPQQSHPAA--PHLADLANYEKRRRSEREERRERE 454

Query: 565 AQA 573
            QA
Sbjct: 455 RQA 457


>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
           protein ZC504.4c protein.
          Length = 1096

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +1

Query: 391 SCLGFADDGGHR--DRPRPCAHHRRQIRRQVPPARQPRCSRLTSADAVDGPEGETGRARA 564
           S  G AD   H    RPRP +HH+R  ++  P A  P  + L + +     E E  R R 
Sbjct: 412 SSRGAADGPRHSPASRPRPVSHHQRSPQQSHPAA--PHLADLANYEKRRRSEREERRERE 469

Query: 565 AQA 573
            QA
Sbjct: 470 RQA 472


>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
           protein ZC504.4a protein.
          Length = 1087

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +1

Query: 391 SCLGFADDGGHR--DRPRPCAHHRRQIRRQVPPARQPRCSRLTSADAVDGPEGETGRARA 564
           S  G AD   H    RPRP +HH+R  ++  P A  P  + L + +     E E  R R 
Sbjct: 412 SSRGAADGPRHSPASRPRPVSHHQRSPQQSHPAA--PHLADLANYEKRRRSEREERRERE 469

Query: 565 AQA 573
            QA
Sbjct: 470 RQA 472


>AF087133-1|AAD14595.1|  728|Caenorhabditis elegans alternatively
           spliced serine/threonineprotein kinase MIG-15 protein.
          Length = 728

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +1

Query: 391 SCLGFADDGGHR--DRPRPCAHHRRQIRRQVPPARQPRCSRLTSADAVDGPEGETGRARA 564
           S  G AD   H    RPRP +HH+R  ++  P A  P  + L + +     E E  R R 
Sbjct: 44  SSRGAADGPRHSPASRPRPVSHHQRSPQQSHPAA--PHLADLANYEKRRRSEREERRERE 101

Query: 565 AQA 573
            QA
Sbjct: 102 RQA 104


>AF087132-1|AAD14594.1|  792|Caenorhabditis elegans alternatively
           spliced serine/threonineprotein kinase MIG-15 protein.
          Length = 792

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +1

Query: 391 SCLGFADDGGHR--DRPRPCAHHRRQIRRQVPPARQPRCSRLTSADAVDGPEGETGRARA 564
           S  G AD   H    RPRP +HH+R  ++  P A  P  + L + +     E E  R R 
Sbjct: 117 SSRGAADGPRHSPASRPRPVSHHQRSPQQSHPAA--PHLADLANYEKRRRSEREERRERE 174

Query: 565 AQA 573
            QA
Sbjct: 175 RQA 177


>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
           spliced serine/threonineprotein kinase MIG-15 protein.
          Length = 1087

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +1

Query: 391 SCLGFADDGGHR--DRPRPCAHHRRQIRRQVPPARQPRCSRLTSADAVDGPEGETGRARA 564
           S  G AD   H    RPRP +HH+R  ++  P A  P  + L + +     E E  R R 
Sbjct: 412 SSRGAADGPRHSPASRPRPVSHHQRSPQQSHPAA--PHLADLANYEKRRRSEREERRERE 469

Query: 565 AQA 573
            QA
Sbjct: 470 RQA 472


>AF016688-5|AAB66073.1|  666|Caenorhabditis elegans Hypothetical
           protein F18A12.7 protein.
          Length = 666

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 233 PGNSDRTMDKFLCKSLDVVEKSM-PSIYMPPEEMYSETRQYVLRRA 367
           P N   + + F+ K  +++E  + P I + P+E+   TR Y+ R+A
Sbjct: 87  PANESLSNETFIFKLAELLEGPLKPFIVVSPDEIIKVTRDYLERKA 132


>AF014940-4|AAB63936.2|  322|Caenorhabditis elegans Hypothetical
           protein W02D7.6 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 22/68 (32%), Positives = 28/68 (41%)
 Frame = +1

Query: 292 EEYAFNLYASRGDVLRDASIRAPTCGFCDATRHSCLGFADDGGHRDRPRPCAHHRRQIRR 471
           +E+   L +SR   LR   IRA TCG C  T  S LG       R R        + +  
Sbjct: 36  DEFRRRLASSRAHELR--GIRAWTCGLCGTTIPSKLGLERHIYRRHRMEYATREGKSLLM 93

Query: 472 QVPPARQP 495
           +   A QP
Sbjct: 94  RKAYAEQP 101


>U29082-7|AAA68404.3|  319|Caenorhabditis elegans Hypothetical
           protein C14F5.4 protein.
          Length = 319

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +3

Query: 36  TNQPAMPNLEVVSRVASIPIVVSG---IGVTEKLYFKIRESNPLFRWSMSLGEKSLATGI 206
           TN+ A   L     V S    VSG   + +  K YF  ++S+PL +  + LG  ++A  I
Sbjct: 127 TNRNAKSTLTTKDLVVSYSTAVSGALAMAIGLKTYFAKKQSSPLAQRLVPLGAVAVANAI 186

Query: 207 QLAL 218
            + +
Sbjct: 187 NIPM 190


>L23648-5|AAN63385.1|  381|Caenorhabditis elegans Cyclin t protein
           1.2, isoform b protein.
          Length = 381

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
 Frame = -3

Query: 383 VASQNPHVGARIDASLSTSPLEAYKLKAYSSRPHPATCKGTCPLYDRSF----------- 237
           +    P V + +  S S+S L+   L++Y  RP P +     P    SF           
Sbjct: 114 IVGMPPQVSSTVTPSGSSSNLKKIDLESYKGRPKPLSNSSDSPSTRPSFLPDVKNQKVVE 173

Query: 236 QELNRREC*LYAGR*GLLTQGHRPTKERVGLPYFEVQFFCHSNTGHDDR 90
           QEL  +     A +  +   GHRP+     L +        +N+ H +R
Sbjct: 174 QELMEQRM-KEAAQQKIHRNGHRPSSSSHPLHHHSTSSSASNNSNHQNR 221


>L23648-4|AAA28033.2|  555|Caenorhabditis elegans Cyclin t protein
           1.2, isoform a protein.
          Length = 555

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
 Frame = -3

Query: 383 VASQNPHVGARIDASLSTSPLEAYKLKAYSSRPHPATCKGTCPLYDRSF----------- 237
           +    P V + +  S S+S L+   L++Y  RP P +     P    SF           
Sbjct: 288 IVGMPPQVSSTVTPSGSSSNLKKIDLESYKGRPKPLSNSSDSPSTRPSFLPDVKNQKVVE 347

Query: 236 QELNRREC*LYAGR*GLLTQGHRPTKERVGLPYFEVQFFCHSNTGHDDR 90
           QEL  +     A +  +   GHRP+     L +        +N+ H +R
Sbjct: 348 QELMEQRM-KEAAQQKIHRNGHRPSSSSHPLHHHSTSSSASNNSNHQNR 395


>AF016437-1|AAB65884.2|  690|Caenorhabditis elegans Hypothetical
           protein F13H6.1 protein.
          Length = 690

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 221 GGSAPGNSDRTMDKFLCKSLDVVEKSMPSIYMPPEEMYSETRQ 349
           GGS P  S R     L ++  ++  S PSI +PP+   S   Q
Sbjct: 584 GGSPPERSIRPTPSALAEATSLLALSAPSISVPPQPQASTVGQ 626


>Z73978-2|CAA98292.2|  728|Caenorhabditis elegans Hypothetical
           protein ZC302.1 protein.
          Length = 728

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +2

Query: 197 DRHTASTPGGSAPGNSDRTMDKFLCKSLDVVEKSMPSIYMPP 322
           ++++A   GG A  +++R  D  L   +DVV K++  + +PP
Sbjct: 531 EQYSAIEEGGLAT-SANRNFDSCLMHQIDVVRKTLKKMPLPP 571


>Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical
           protein C14H10.4 protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +3

Query: 186 KSLATGIQLALPAVQLLETPIV-QWTSSFASRWMWSRRVCLQFIC 317
           +S+   + L LPAV +L  P+V  +   F S++ W       FIC
Sbjct: 249 QSIGPTVLLVLPAVPVLLCPVVASFFHFFFSKFSWQTGWLYSFIC 293


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical protein
            K10D2.1a protein.
          Length = 1223

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 75   RVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGE 185
            R+ S+P++   IGVTE   + + E+  L  W++ LG+
Sbjct: 984  RLDSLPVL---IGVTEHAAYALTENGRLSTWNLKLGK 1017


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,489,029
Number of Sequences: 27780
Number of extensions: 396155
Number of successful extensions: 1275
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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