Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0841X.Seq
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   4.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.4  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   8.4  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 291 LARHHCQELGKVFVPFP 241
           L    C+E G +FVP P
Sbjct: 759 LVAKRCEERGILFVPIP 775


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 247 RHEDFPEFLTMMARKMKD 300
           +HED P+ L+M   K  D
Sbjct: 290 KHEDLPQDLSMKLSKNND 307


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 247 RHEDFPEFLTMMARKMKD 300
           +HED P+ L+M   K  D
Sbjct: 182 KHEDLPQDLSMKLSKNND 199


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 417  SEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 319
            S+ + + G+DV  L +  + VAV+  D  G  D
Sbjct: 1565 SKTVIDAGYDVPVLAQNLDWVAVMTYDFHGQWD 1597


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 39  ATLKNHRLRRKSD 1
           ATLK+H+L   SD
Sbjct: 559 ATLKDHKLAEASD 571


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 158 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTKTFPS 268
           E+ TV+  L + PT   LQ+M     A     + +PS
Sbjct: 42  EMVTVLGDLHRKPTYNNLQEMKYLERAIKESLRLYPS 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,037
Number of Sequences: 336
Number of extensions: 1623
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)