Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0838X.Seq
(442 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 33 0.026
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 32 0.034
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 31 0.059
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 30 0.14
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 30 0.18
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 0.42
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 0.42
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 0.55
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 0.73
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 0.73
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 27 1.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 1.7
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 27 1.7
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 26 2.2
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 26 3.0
SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2 |Schizos... 26 3.0
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 26 3.0
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 26 3.0
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 26 3.0
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual 25 5.2
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 25 5.2
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 25 5.2
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 5.2
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 5.2
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 25 5.2
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 25 6.8
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch... 25 6.8
SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces po... 25 6.8
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 25 6.8
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 24 9.0
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 24 9.0
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 24 9.0
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 32.7 bits (71), Expect = 0.026
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +1
Query: 34 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDAN---LRAEKAEEEARQLQKKIQ 204
K T + + K + +K ++ L+ + EQ+ +AN L+ E+ E + ++I
Sbjct: 54 KQSATDSELLHKNLDEIKFLQNEKLNNEKLLEQEQNEANDYRLKVERLEHKISDYVQEIN 113
Query: 205 TIENELDQTQESLMQVKESSKRRRRL 282
++ ++L Q Q+S + E + + RL
Sbjct: 114 SLNSQL-QIQKSNPEKHEDAVSQNRL 138
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 32.3 bits (70), Expect = 0.034
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 34 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIE 213
++K ++ + + + E D++ + C QAK + +A ++++ ++QTI
Sbjct: 185 RSKDEQVKELNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAAQLQTIH 244
Query: 214 NELDQTQESLMQVKE 258
E +Q Q +++++E
Sbjct: 245 EEYEQQQAHIVRMEE 259
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 31.5 bits (68), Expect = 0.059
Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 25 GS*KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEA--RQLQKK 198
G+ + + + ++ Q ++EK++ E+ +D + +E ++EEA ++L+++
Sbjct: 18 GNKMRELLEKEHLRMTQQNAEIEKEDEEYNIEEEEEAERDIEISSESSDEEAELKKLEEE 77
Query: 199 IQTIENELDQTQESLMQVKESSKRRRRLCRTLSPKWLP 312
+ +E L + +E + + K R L RTL P P
Sbjct: 78 GEEVEKIL-RDEERIKKRKIQKNRAANLQRTLQPPKRP 114
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 30.3 bits (65), Expect = 0.14
Identities = 20/73 (27%), Positives = 41/73 (56%)
Frame = +1
Query: 64 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESL 243
K+K + KL+K + A E+ A++ LR E+ E+ + +K+ + ++ E ++ +
Sbjct: 667 KQKEREKKLKKQQ---QEADREKMAREQRLREEE-EKRILEERKRREKLDKEEEERRRRE 722
Query: 244 MQVKESSKRRRRL 282
+ KES ++ RRL
Sbjct: 723 LLEKESEEKERRL 735
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 29.9 bits (64), Expect = 0.18
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 64 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAE---EEARQLQKKIQTIENELDQ 228
++K ++ K+E+ + R E Q+K NLR + E ++ R LQ+KI +E +L Q
Sbjct: 17 QQKRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQ 74
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.7 bits (61), Expect = 0.42
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = +1
Query: 34 KNKTTKMDAIKKKMQAMKLEKDN-----ALDRAAMCEQQAKDANL--RAEKAEEEARQLQ 192
KN +++++ K K +++ E++ A R+++ + N+ + + +E R+L+
Sbjct: 590 KNLESELNSSKIKNESLLNERNLLKEMLATSRSSILSHNSSAGNIDDKMKSIDESTRELE 649
Query: 193 KKIQTIENELDQTQESL 243
K + NE+ QESL
Sbjct: 650 KNYEVYRNEMTAIQESL 666
Score = 24.6 bits (51), Expect = 6.8
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Frame = +1
Query: 76 QAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKI--------QTIENELDQT 231
Q + + +D + CE KD+ R EE + L ++ Q +E E D
Sbjct: 986 QRIVILQDEIASSSLRCENITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYK 1045
Query: 232 QESLMQVKESSKRR 273
Q+ L+ ++ K R
Sbjct: 1046 QQLLLVTEDLRKTR 1059
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.7 bits (61), Expect = 0.42
Identities = 17/79 (21%), Positives = 39/79 (49%)
Frame = +1
Query: 43 TTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENEL 222
T ++ ++ ++ ++ EKD+ + + +D + + E E RQLQ ++ + EL
Sbjct: 248 TERIRFLENALEKVQREKDS------LSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEEL 301
Query: 223 DQTQESLMQVKESSKRRRR 279
D Q+ L + ++ +R
Sbjct: 302 DVAQDLLTEKEDEIATLKR 320
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.3 bits (60), Expect = 0.55
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +1
Query: 94 KDNALDRAAMCEQQAKDAN--LRAEKAEEEARQLQKKIQTIENELDQTQES 240
K ++L R A +Q+ + N L ++ AE EA +QK+I+++++ Q QES
Sbjct: 1425 KKSSLTRFAHLKQELTNKNKELTSKNAENEA--MQKEIESLKDSNHQLQES 1473
Score = 27.5 bits (58), Expect = 0.97
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +1
Query: 88 LEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVKE 258
LEKD + + QQ ++NLR + E +++K+ + + ++ S Q+ E
Sbjct: 243 LEKDALQRKVSSLSQQFTESNLRYQNIVAELSEMRKQYEFSQVSFEKEISSQKQISE 299
Score = 27.5 bits (58), Expect = 0.97
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +1
Query: 58 AIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQE 237
A+ ++ Q + A R E KD + E+E + L +++Q + +ELD +
Sbjct: 463 AMSEQYQKSLEDCQKAKSRYEQLETLFKDKCTENKHYEQETKDLARQVQVLLHELDLCEN 522
Query: 238 SLMQVKESSKR 270
++ +S K+
Sbjct: 523 GIVLGVDSRKK 533
Score = 26.2 bits (55), Expect = 2.2
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 127 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVKES 261
EQQ +++ + ++ E L+ + + +ENEL Q +E L + S
Sbjct: 63 EQQLRNSEKKLLQSNERYDLLEDERKLLENELSQIKEYLREKSSS 107
Score = 25.0 bits (52), Expect = 5.2
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 76 QAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQK-KIQTIENELDQTQESLMQ 249
+++ LEK N L+++ + +++KD + K+ +E +K ++Q + ++L L Q
Sbjct: 718 RSLALEKLNDLEKSLVLSERSKDELDESYKSLQEQLASKKIEVQNVSSQLSICNSQLEQ 776
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.9 bits (59), Expect = 0.73
Identities = 14/68 (20%), Positives = 33/68 (48%)
Frame = +1
Query: 55 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQ 234
+A+ ++ ++++ + + ++ AEK EE Q+K+ + ELD T+
Sbjct: 620 EALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDYTK 679
Query: 235 ESLMQVKE 258
+ Q++E
Sbjct: 680 SNCKQMEE 687
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.9 bits (59), Expect = 0.73
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = +1
Query: 49 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQ 228
K++ + ++ +KLE+ NA + KD + + + +EE + +I ++E ++D+
Sbjct: 3323 KLEPLNSEVDRLKLEQKNAEECIQETIAACKDLDEKLLQLQEEYASMISEIHSMELQMDE 3382
Query: 229 TQ 234
+
Sbjct: 3383 VK 3384
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 27.1 bits (57), Expect = 1.3
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 426 RARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQ 292
RAR H RP R + R + + A G PP+ + SG R +
Sbjct: 81 RARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKRAR 125
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.6 bits (56), Expect = 1.7
Identities = 13/76 (17%), Positives = 34/76 (44%)
Frame = +1
Query: 40 KTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENE 219
+ ++ D +K + + ++ + KD+ + EEE +L++ +TI ++
Sbjct: 327 RISEFDNLKSERDTLSIKNEKLEKLLRNTIGSLKDSRTSNSQLEEEMVELKESNRTIHSQ 386
Query: 220 LDQTQESLMQVKESSK 267
L + L ++ +K
Sbjct: 387 LTDAESKLSSFEQENK 402
Score = 25.0 bits (52), Expect = 5.2
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 127 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVK 255
EQ + +K E ++L+ QTI +L T L Q++
Sbjct: 601 EQNFSSLDTSFKKLNESHQELENNHQTITKQLKDTSSKLQQLQ 643
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 26.6 bits (56), Expect = 1.7
Identities = 13/68 (19%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 64 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENE-LDQTQES 240
+ ++Q ++ + N +++AAM + K+ + +E ARQL+ + + + E +++ Q+
Sbjct: 76 ESQLQQLQQQSFN-MEQAAMTTESLKNTMATVQTMQETARQLKSQSKNVSIEKIEKLQDE 134
Query: 241 LMQVKESS 264
+ +++
Sbjct: 135 IQDYMDAA 142
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 26.2 bits (55), Expect = 2.2
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 157 AEKAEEEARQLQKKIQTIENELDQTQESLMQVKESSKRRRR 279
A + + +L+KK + +E + T +S ++ SK+R R
Sbjct: 338 ASQVRKPVGKLEKKFENLEKSIGDTLKSSIRSSPKSKKRSR 378
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 25.8 bits (54), Expect = 3.0
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = +1
Query: 46 TKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIEN 216
TK A KKK + K +K+N + ++ + ++++ + L +K++ +EN
Sbjct: 32 TKPPASKKKRKNRKKKKNNGPSEQFVGNNDLEEQRSGSIDSKDKEKPLDEKVKELEN 88
Score = 25.4 bits (53), Expect = 3.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 261 LEEKEKALQNAESEVAALNRRIQ 329
L+EK K L+NA ++ L RRIQ
Sbjct: 79 LDEKVKELENANKTLSDLVRRIQ 101
>SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 980
Score = 25.8 bits (54), Expect = 3.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 85 KLEKDNALDRAAMCEQQAKDANLRAEKAEEEAR--QLQKK 198
K EK+ +R + + A L A+KA+EEAR +L KK
Sbjct: 25 KTEKELERERQKAAKLEKYHAKLAAKKAKEEARKPKLDKK 64
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 25.8 bits (54), Expect = 3.0
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +1
Query: 34 KNKT-TKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTI 210
KN+ +K +K+K + EK + ++ NL+ E + Q + I
Sbjct: 515 KNEAWSKQKEVKEKRNTRR-EKRKSKKEFLKAQKNEASNNLKQEIVSKAGAQETENDDLI 573
Query: 211 ENELD---QTQESLMQVKESSKRRRR 279
+ E D + +E Q+K+S KR+ +
Sbjct: 574 DEESDALSELEEDYRQLKKSKKRKNQ 599
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 25.8 bits (54), Expect = 3.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 151 LRAEKAEEEARQLQKKIQTIENELDQTQESL 243
L +EK E +QL KIQ + + +DQT + +
Sbjct: 163 LGSEKLRFERKQLVSKIQKMLDHVDQTSQEV 193
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 3.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 64 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQ 186
KK A K KDN +A + QQ ++ NL+ + +++++
Sbjct: 181 KKSSDAWKERKDNE-KKAMLMRQQRREENLKKRRESKKSKK 220
>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 25.0 bits (52), Expect = 5.2
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 109 DRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVKES 261
D+ A+ Q+ + ++ AE EA K++ ++ +LD E+L KES
Sbjct: 3 DQDALDTQEKELLEMKERVAEMEAEAA--KLRAMQEQLDNETEALRNDKES 51
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 5.2
Identities = 20/89 (22%), Positives = 34/89 (38%)
Frame = +1
Query: 40 KTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENE 219
K KM KK+Q EK + A EQ ++ + EEE+ + Q EN+
Sbjct: 492 KLEKMGGWMKKLQDENSEKTETI---AQLEQIIEELHEELRSLEEESIKESSATQQNENQ 548
Query: 220 LDQTQESLMQVKESSKRRRRLCRTLSPKW 306
++ L+ + + + T W
Sbjct: 549 HKRSSRKLLYEDKQAIQEAHTINTKRKLW 577
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.0 bits (52), Expect = 5.2
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 55 DAIKKKM--QAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQ 228
D +K K+ Q LEK + Q A LR + +Q QK++QT+ +++
Sbjct: 100 DLLKDKIEDQNNSLEKTEFIALQNANSLQDTQAKLRLDPLLAIKQQEQKQLQTL---MEK 156
Query: 229 TQESLMQVKESSKRRRR 279
+ SL ++S +RR R
Sbjct: 157 RKYSLDSDRKSKERRHR 173
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.0 bits (52), Expect = 5.2
Identities = 14/69 (20%), Positives = 31/69 (44%)
Frame = +1
Query: 64 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESL 243
+KK + ++ K+N L+ + Q + + + A++ QK + E ++ E
Sbjct: 96 RKKRKELESAKNNLLNVYDSLKMQKASVSSMVNRKQRAAKEEQKIQEEFERQITDLLEEQ 155
Query: 244 MQVKESSKR 270
Q+K +R
Sbjct: 156 QQLKLEIER 164
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.0 bits (52), Expect = 5.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 118 AMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQ 249
A EQQ + E++ Q +++T+ENEL Q +L +
Sbjct: 415 AELEQQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQE 458
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 25.0 bits (52), Expect = 5.2
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 55 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQT 231
D +K+K++ KLE +N ++ E++ KD + +K + + KKI +NE+D +
Sbjct: 168 DIMKRKLETEKLEANNKEEKE---EKEGKDD--KDDKEDSNDTKNDKKIS--KNEVDSS 219
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 24.6 bits (51), Expect = 6.8
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 37 NKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKD---ANLRAEKAEEEARQLQKKIQT 207
N T K + + K D ++ +C++QA+ +L + + E+ + + K Q
Sbjct: 452 NATRKKNGVYLAESTYKELMDRVQNKDLLCQEQARKLEVLDLNVKSSREQLQYVSKSNQE 511
Query: 208 IENELDQTQESLM 246
+ E++ Q L+
Sbjct: 512 HKKEVEALQLQLV 524
>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 24.6 bits (51), Expect = 6.8
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +1
Query: 55 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQ---KKIQTIENELD 225
D I + + KD+ALD + E + K + + RQ Q +++ + +L
Sbjct: 618 DDISESLMQNSKRKDSALDTNQLFELELKKFDPLRNRLHASYRQQQLLLNEMRNVTQKLK 677
Query: 226 QTQESL--MQVKESS-KRRRRLCRTL 294
Q E L M+V + + + LC L
Sbjct: 678 QNPEFLRKMEVYNNQFSKNKELCSNL 703
>SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 586
Score = 24.6 bits (51), Expect = 6.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 205 SGSSSEAVSPLLRPSQHEG 149
S SS+ V P + PSQH+G
Sbjct: 17 SASSAVNVEPKVEPSQHQG 35
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 24.6 bits (51), Expect = 6.8
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +1
Query: 40 KTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENE 219
K+ K D KKK A + EK + + EQ+A+ E+ E R +++++++ ++
Sbjct: 15 KSRKQDEEKKKKDAEEDEKWSKGVKTNKKEQEAEKRKAALERKAERERLEKEEMESLPSK 74
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 24.2 bits (50), Expect = 9.0
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +1
Query: 49 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQ 228
K+D IK++ + +K EK+ RAA E+ +A++ E Q + + I+ +
Sbjct: 44 KLDEIKEREKELKREKEE--QRAAHAEKIRTRRQAKADRERMELLQAKLHQKVIDRRRRR 101
Query: 229 TQESLM 246
+ + M
Sbjct: 102 EKRNKM 107
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 24.2 bits (50), Expect = 9.0
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +1
Query: 130 QQAKDANLRA-EKAEEEAR--QLQKKIQTIENELDQTQESLMQVKESSKRR 273
Q++ D +A K +++AR LQK Q + +Q ++ L +++ KRR
Sbjct: 79 QKSNDETAQAMRKMQDQARLRDLQKIRQQKAEDAEQRKKILAEIERDKKRR 129
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 24.2 bits (50), Expect = 9.0
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +1
Query: 97 DNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVKESSKRRR 276
D+A+ + AK + KAE+ + ++ I N ++ SL + S RRR
Sbjct: 869 DSAIIKRLRLSNLAKRKDKSVTKAEQARKSIEIDKAIIRNSQSTSRPSLTASRPSLSRRR 928
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,161,064
Number of Sequences: 5004
Number of extensions: 17823
Number of successful extensions: 137
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 160149590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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