Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0838X.Seq
(442 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 29 0.073
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 28 0.13
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 25 0.90
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 25 0.90
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 0.90
AY187044-1|AAO39758.1| 87|Anopheles gambiae putative antennal ... 23 3.6
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 23 4.8
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 22 8.4
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 29.1 bits (62), Expect = 0.073
Identities = 12/61 (19%), Positives = 37/61 (60%)
Frame = +1
Query: 61 IKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQES 240
++++++ MKL + A + ++ +++ R + + + + ++ +QTIE +L +T+++
Sbjct: 968 LREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTIETKLQETKDT 1027
Query: 241 L 243
L
Sbjct: 1028 L 1028
Score = 24.6 bits (51), Expect = 1.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 180 ETASEEDPDN*KRARPDTGVSHAG*GKLEEKEKALQNAESEVAALN 317
ETA ++ +N R T A GKL+E A+Q+ S+ L+
Sbjct: 544 ETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGKVLD 589
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 28.3 bits (60), Expect = 0.13
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +1
Query: 67 KKMQAMKLEKDNALDRAA--MCEQQAKDANLRAEKAEEEA--RQLQKKIQTIENELDQTQ 234
KK+Q L + L + A + E + ++ LR E +LQK I+ + +LDQ +
Sbjct: 754 KKLQQELLTNEQQLQQLAGVVFEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVR 813
Query: 235 ESLMQVKESSKRRR 276
++ Q +++++ ++
Sbjct: 814 RTVQQEEQTAQAKK 827
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 25.4 bits (53), Expect = 0.90
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Frame = +1
Query: 64 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQK----------KIQTIE 213
+++ Q + E D ++ E K+ R + E+ R LQ+ K++ E
Sbjct: 618 RQEHQRLVRECDKIRNQRGQIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQE 677
Query: 214 NELDQTQESLMQVKESSKRRRRLCRTL 294
+ + L+ V E + R CRT+
Sbjct: 678 QKCKELTARLVNVDEEKVKFERSCRTI 704
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 25.4 bits (53), Expect = 0.90
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +1
Query: 67 KKMQAMKLEKDNALDRAAMC-----EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQT 231
KK+Q K + +++ AM E+Q K+ R + E++ +KKIQ I +LD+
Sbjct: 968 KKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVEDD----KKKIQAIITDLDEE 1023
Query: 232 QESLMQV 252
++ ++V
Sbjct: 1024 KKKKLKV 1030
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 25.4 bits (53), Expect = 0.90
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 130 QQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVKESSKRR 273
QQA+ RA K +EE R L++K + E + Q + E +R+
Sbjct: 821 QQAQYHVSRARKIDEEERSLRQKQELEREEFKRRQAEDRRRMEEMRRK 868
Score = 22.6 bits (46), Expect = 6.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 269 EGEGSAER*VRSGCPEPTYPTAGGGPREVRGASR 370
EG G+ + R G +P GGG R+ + +R
Sbjct: 929 EGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKAR 962
>AY187044-1|AAO39758.1| 87|Anopheles gambiae putative antennal
carrier protein AP-2 protein.
Length = 87
Score = 23.4 bits (48), Expect = 3.6
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +1
Query: 40 KTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAE----KAEEEARQLQKKI 201
K DA K L LD+ A+ KDA + E KA+++A ++ KK+
Sbjct: 24 KDAAKDATDKVKDKAALPDAPKLDKDAVTTPDPKDAAKKVEDAAGKAKDQAAEVGKKL 81
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 23.0 bits (47), Expect = 4.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 150 VGVFGLLLTHGSAVERI 100
V +FG+LLTHG + ++
Sbjct: 527 VSLFGVLLTHGYLIMQV 543
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 22.2 bits (45), Expect = 8.4
Identities = 11/62 (17%), Positives = 30/62 (48%)
Frame = +1
Query: 88 LEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVKESSK 267
+ K +AA + + ++ EE+ +++++ + ++ + + L + KE +K
Sbjct: 77 INKPTVATKAASTTPELELLKATIQQLEEQNLEMKEQNFRLAEQITRMCQLLQEEKEEAK 136
Query: 268 RR 273
RR
Sbjct: 137 RR 138
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,940
Number of Sequences: 2352
Number of extensions: 5248
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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