Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0836X.Seq
(399 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66521-18|CAO82066.1| 134|Caenorhabditis elegans Hypothetical p... 77 6e-15
Z66521-17|CAI46628.1| 103|Caenorhabditis elegans Hypothetical p... 77 6e-15
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 77 6e-15
Z34802-9|CAB54281.3| 160|Caenorhabditis elegans Hypothetical pr... 31 0.30
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 29 1.6
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 29 1.6
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 29 1.6
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 29 1.6
AF026213-8|AAB71303.1| 226|Caenorhabditis elegans Hypothetical ... 27 5.0
Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical pr... 27 6.5
U58756-5|AAY44006.1| 288|Caenorhabditis elegans Hypothetical pr... 27 6.5
>Z66521-18|CAO82066.1| 134|Caenorhabditis elegans Hypothetical
protein W02B12.15b protein.
Length = 134
Score = 76.6 bits (180), Expect = 6e-15
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +2
Query: 269 KVVDFMAIEVITEKASLCRCWRSKNWPYCDGSHGPHNKETGEN 397
K+VD + IE I EK + CRCW+S+ WPYCDGSHG HNKETG+N
Sbjct: 81 KIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDN 123
>Z66521-17|CAI46628.1| 103|Caenorhabditis elegans Hypothetical
protein W02B12.15a protein.
Length = 103
Score = 76.6 bits (180), Expect = 6e-15
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +2
Query: 269 KVVDFMAIEVITEKASLCRCWRSKNWPYCDGSHGPHNKETGEN 397
K+VD + IE I EK + CRCW+S+ WPYCDGSHG HNKETG+N
Sbjct: 50 KIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDN 92
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 76.6 bits (180), Expect = 6e-15
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +2
Query: 269 KVVDFMAIEVITEKASLCRCWRSKNWPYCDGSHGPHNKETGEN 397
K+VD + IE I EK + CRCW+S+ WPYCDGSHG HNKETG+N
Sbjct: 81 KIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDN 123
>Z34802-9|CAB54281.3| 160|Caenorhabditis elegans Hypothetical
protein M88.7 protein.
Length = 160
Score = 31.1 bits (67), Expect = 0.30
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 317 LCRCWRSKNWPYCDGSH 367
LC C ++ N P+CDGSH
Sbjct: 130 LCNCKQTNNRPFCDGSH 146
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 328 ASAKGCLLSYNLNGHKVHN 272
A+ KGC SY LNGH N
Sbjct: 107 ATGKGCATSYTLNGHAATN 125
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 328 ASAKGCLLSYNLNGHKVHN 272
A+ KGC SY LNGH N
Sbjct: 107 ATGKGCATSYTLNGHAATN 125
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 328 ASAKGCLLSYNLNGHKVHN 272
A+ KGC SY LNGH N
Sbjct: 107 ATGKGCATSYTLNGHAATN 125
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 328 ASAKGCLLSYNLNGHKVHN 272
A+ KGC SY LNGH N
Sbjct: 107 ATGKGCATSYTLNGHAATN 125
>AF026213-8|AAB71303.1| 226|Caenorhabditis elegans Hypothetical
protein F08F1.3 protein.
Length = 226
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 5 HFLVCFAKSLKMYVVSNLVKVTIPNYLSSLPIP 103
HF +CF K+ + KV +PN +LP+P
Sbjct: 181 HFPLCFVFDSKIADKYAISKVHLPNNFLTLPVP 213
>Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical
protein F57A8.5 protein.
Length = 352
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 69 PFPTICRACQFQILLADGFVLEL 137
P+P C++C+FQ L G LE+
Sbjct: 65 PYPLKCQSCRFQRCLDAGMYLEV 87
>U58756-5|AAY44006.1| 288|Caenorhabditis elegans Hypothetical
protein F58F9.8 protein.
Length = 288
Score = 26.6 bits (56), Expect = 6.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 134 VKDWLALIPPTVVVGGISYYSYQTIKKAREAGNGQI--KPWNRRAFIKVVDFM 286
VK + P VV S +YQT+K +A NG++ W + V+ ++
Sbjct: 183 VKSKNSYYPMIVVYDDPSCTAYQTLKAFNDAANGEVPCNSWKGYVYATVIRYV 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,421,290
Number of Sequences: 27780
Number of extensions: 158686
Number of successful extensions: 473
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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