BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= pg--0830.Seq (691 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z46940-3|CAB92526.1| 103|Homo sapiens protamin 3 protein. 40 0.008 BC053542-1|AAH53542.1| 628|Homo sapiens DYNC1I1 protein protein. 32 1.7 BC037854-1|AAH37854.1| 628|Homo sapiens DYNC1I1 protein protein. 32 1.7 BC032945-1|AAH32945.1| 628|Homo sapiens DYNC1I1 protein protein. 32 1.7 BC022540-1|AAH22540.1| 625|Homo sapiens DYNC1I1 protein protein. 32 1.7 AK091339-1|BAC03639.1| 628|Homo sapiens protein ( Homo sapiens ... 32 1.7 AF123074-1|AAD26852.1| 608|Homo sapiens cytoplasmic dynein inte... 32 1.7 AF063228-1|AAC33443.1| 645|Homo sapiens cytoplasmic dynein inte... 32 1.7 AC022261-1|AAS01994.1| 142|Homo sapiens unknown protein. 32 1.7 M21984-1|AAA36777.1| 258|Homo sapiens troponin T protein. 31 3.9 DQ778624-1|ABG77458.1| 250|Homo sapiens troponin T type 3 protein. 31 3.9 CR541927-1|CAG46725.1| 256|Homo sapiens TNNT3 protein. 31 3.9 BX640689-1|CAE45814.1| 256|Homo sapiens hypothetical protein pr... 31 3.9 BT019997-1|AAV38800.1| 256|Homo sapiens troponin T3, skeletal, ... 31 3.9 BC117327-1|AAI17328.1| 250|Homo sapiens troponin T type 3 (skel... 31 3.9 BC062430-1|AAH62430.1| 154|Homo sapiens TNNT3 protein protein. 31 3.9 BC050446-1|AAH50446.1| 272|Homo sapiens TNNT3 protein protein. 31 3.9 AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 3.9 AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 3.9 AF026276-1|AAF21629.1| 258|Homo sapiens fast skeletal troponin ... 31 3.9 Z98884-5|CAI21436.1| 1201|Homo sapiens period homolog 3 (Drosoph... 30 6.8 Z98884-4|CAI21435.1| 1210|Homo sapiens period homolog 3 (Drosoph... 30 6.8 Z98884-3|CAI21434.1| 378|Homo sapiens period homolog 3 (Drosoph... 30 6.8 EF015893-1|ABM64204.1| 1201|Homo sapiens period 3 protein. 30 6.8 BC146781-1|AAI46782.1| 1210|Homo sapiens PER3 protein protein. 30 6.8 BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 6.8 BC026102-1|AAH26102.1| 378|Homo sapiens PER3 protein protein. 30 6.8 AY493418-1|AAS72879.1| 1201|Homo sapiens growth-inhibiting prote... 30 6.8 AL157954-1|CAB76084.1| 1201|Homo sapiens hypothetical protein pr... 30 6.8 AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 6.8 AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 6.8 AB047686-1|BAB32925.2| 1233|Homo sapiens period (Drosophila) hom... 30 6.8 >Z46940-3|CAB92526.1| 103|Homo sapiens protamin 3 protein. Length = 103 Score = 39.9 bits (89), Expect = 0.008 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 5/65 (7%) Frame = +3 Query: 483 PGYAPGHESASKTGPNFTIQK-----KSENFGLSNAQLERNKTKEQLEEEKKISLSIRIK 647 PG++PGH + G +++K +NF LS+A E + +E+ EEE+K L ++ K Sbjct: 14 PGHSPGHSTGHGRGHESSMKKLMACVSQDNFSLSSAGEEEEEEEEEGEEEEKEELPVQGK 73 Query: 648 PLTIE 662 L +E Sbjct: 74 LLLLE 78 >BC053542-1|AAH53542.1| 628|Homo sapiens DYNC1I1 protein protein. Length = 628 Score = 32.3 bits (70), Expect = 1.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 Query: 439 IEEKRQRLEEAEKKRQAMLQAMKVPARPDPTSPSKRR 549 I E+++R EE KK++A +Q K P + D KRR Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57 >BC037854-1|AAH37854.1| 628|Homo sapiens DYNC1I1 protein protein. Length = 628 Score = 32.3 bits (70), Expect = 1.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 Query: 439 IEEKRQRLEEAEKKRQAMLQAMKVPARPDPTSPSKRR 549 I E+++R EE KK++A +Q K P + D KRR Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57 >BC032945-1|AAH32945.1| 628|Homo sapiens DYNC1I1 protein protein. Length = 628 Score = 32.3 bits (70), Expect = 1.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 Query: 439 IEEKRQRLEEAEKKRQAMLQAMKVPARPDPTSPSKRR 549 I E+++R EE KK++A +Q K P + D KRR Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57 >BC022540-1|AAH22540.1| 625|Homo sapiens DYNC1I1 protein protein. Length = 625 Score = 32.3 bits (70), Expect = 1.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 Query: 439 IEEKRQRLEEAEKKRQAMLQAMKVPARPDPTSPSKRR 549 I E+++R EE KK++A +Q K P + D KRR Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57 >AK091339-1|BAC03639.1| 628|Homo sapiens protein ( Homo sapiens cDNA FLJ34020 fis, clone FCBBF2002904, highly similar to DYNEIN INTERMEDIATE CHAIN 1, CYTOSOLIC. ). Length = 628 Score = 32.3 bits (70), Expect = 1.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 Query: 439 IEEKRQRLEEAEKKRQAMLQAMKVPARPDPTSPSKRR 549 I E+++R EE KK++A +Q K P + D KRR Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57 >AF123074-1|AAD26852.1| 608|Homo sapiens cytoplasmic dynein intermediate chain 1 protein. Length = 608 Score = 32.3 bits (70), Expect = 1.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 Query: 439 IEEKRQRLEEAEKKRQAMLQAMKVPARPDPTSPSKRR 549 I E+++R EE KK++A +Q K P + D KRR Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57 >AF063228-1|AAC33443.1| 645|Homo sapiens cytoplasmic dynein intermediate chain 1 protein. Length = 645 Score = 32.3 bits (70), Expect = 1.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 Query: 439 IEEKRQRLEEAEKKRQAMLQAMKVPARPDPTSPSKRR 549 I E+++R EE KK++A +Q K P + D KRR Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57 >AC022261-1|AAS01994.1| 142|Homo sapiens unknown protein. Length = 142 Score = 32.3 bits (70), Expect = 1.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 Query: 439 IEEKRQRLEEAEKKRQAMLQAMKVPARPDPTSPSKRR 549 I E+++R EE KK++A +Q K P + D KRR Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57 >M21984-1|AAA36777.1| 258|Homo sapiens troponin T protein. Length = 258 Score = 31.1 bits (67), Expect = 3.9 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +3 Query: 564 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLR 686 L+ A +R K + E +KKI L+ R KPL I+ L DKLR Sbjct: 158 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLR 197 >DQ778624-1|ABG77458.1| 250|Homo sapiens troponin T type 3 protein. Length = 250 Score = 31.1 bits (67), Expect = 3.9 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +3 Query: 564 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLR 686 L+ A +R K + E +KKI L+ R KPL I+ L DKLR Sbjct: 150 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLR 189 >CR541927-1|CAG46725.1| 256|Homo sapiens TNNT3 protein. Length = 256 Score = 31.1 bits (67), Expect = 3.9 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +3 Query: 564 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLR 686 L+ A +R K + E +KKI L+ R KPL I+ L DKLR Sbjct: 156 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLR 195 >BX640689-1|CAE45814.1| 256|Homo sapiens hypothetical protein protein. Length = 256 Score = 31.1 bits (67), Expect = 3.9 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +3 Query: 564 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLR 686 L+ A +R K + E +KKI L+ R KPL I+ L DKLR Sbjct: 156 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLR 195 >BT019997-1|AAV38800.1| 256|Homo sapiens troponin T3, skeletal, fast protein. Length = 256 Score = 31.1 bits (67), Expect = 3.9 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +3 Query: 564 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLR 686 L+ A +R K + E +KKI L+ R KPL I+ L DKLR Sbjct: 156 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLR 195 >BC117327-1|AAI17328.1| 250|Homo sapiens troponin T type 3 (skeletal, fast) protein. Length = 250 Score = 31.1 bits (67), Expect = 3.9 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +3 Query: 564 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLR 686 L+ A +R K + E +KKI L+ R KPL I+ L DKLR Sbjct: 150 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLR 189 >BC062430-1|AAH62430.1| 154|Homo sapiens TNNT3 protein protein. Length = 154 Score = 31.1 bits (67), Expect = 3.9 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +3 Query: 564 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLR 686 L+ A +R K + E +KKI L+ R KPL I+ L DKLR Sbjct: 54 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLR 93 >BC050446-1|AAH50446.1| 272|Homo sapiens TNNT3 protein protein. Length = 272 Score = 31.1 bits (67), Expect = 3.9 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +3 Query: 564 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLR 686 L+ A +R K + E +KKI L+ R KPL I+ L DKLR Sbjct: 172 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLR 211 >AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive matrix 1 protein. Length = 913 Score = 31.1 bits (67), Expect = 3.9 Identities = 16/58 (27%), Positives = 31/58 (53%) Frame = +2 Query: 170 KPAPKQEGEGDPEFIKRQDQKRSDLDEQ*RNTSTNGANSGPRRRMSSNALKRSRPSAR 343 +P+P++ + + E K + + RS + R S + +++ PRRR S + +R P R Sbjct: 258 EPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRRRPSPRRR 315 >AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive matrix 1 protein. Length = 913 Score = 31.1 bits (67), Expect = 3.9 Identities = 16/58 (27%), Positives = 31/58 (53%) Frame = +2 Query: 170 KPAPKQEGEGDPEFIKRQDQKRSDLDEQ*RNTSTNGANSGPRRRMSSNALKRSRPSAR 343 +P+P++ + + E K + + RS + R S + +++ PRRR S + +R P R Sbjct: 258 EPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRRRPSPRRR 315 >AF026276-1|AAF21629.1| 258|Homo sapiens fast skeletal troponin T protein. Length = 258 Score = 31.1 bits (67), Expect = 3.9 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +3 Query: 564 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLR 686 L+ A +R K + E +KKI L+ R KPL I+ L DKLR Sbjct: 158 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLR 197 >Z98884-5|CAI21436.1| 1201|Homo sapiens period homolog 3 (Drosophila) protein. Length = 1201 Score = 30.3 bits (65), Expect = 6.8 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = +3 Query: 492 APGHESASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL-----EEEKKISLSIRIKPLT 656 A G ES + P F +Q+K + S Q +RN+ E+L E +K R KP T Sbjct: 18 ALGEESGERWSPEFHLQRKLADSSHSEQQ-DRNRVSEELIMVVQEMKKYFPSERRNKPST 76 Query: 657 IEGLS 671 ++ L+ Sbjct: 77 LDALN 81 >Z98884-4|CAI21435.1| 1210|Homo sapiens period homolog 3 (Drosophila) protein. Length = 1210 Score = 30.3 bits (65), Expect = 6.8 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = +3 Query: 492 APGHESASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL-----EEEKKISLSIRIKPLT 656 A G ES + P F +Q+K + S Q +RN+ E+L E +K R KP T Sbjct: 18 ALGEESGERWSPEFHLQRKLADSSHSEQQ-DRNRVSEELIMVVQEMKKYFPSERRNKPST 76 Query: 657 IEGLS 671 ++ L+ Sbjct: 77 LDALN 81 >Z98884-3|CAI21434.1| 378|Homo sapiens period homolog 3 (Drosophila) protein. Length = 378 Score = 30.3 bits (65), Expect = 6.8 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = +3 Query: 492 APGHESASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL-----EEEKKISLSIRIKPLT 656 A G ES + P F +Q+K + S Q +RN+ E+L E +K R KP T Sbjct: 18 ALGEESGERWSPEFHLQRKLADSSHSEQQ-DRNRVSEELIMVVQEMKKYFPSERRNKPST 76 Query: 657 IEGLS 671 ++ L+ Sbjct: 77 LDALN 81 >EF015893-1|ABM64204.1| 1201|Homo sapiens period 3 protein. Length = 1201 Score = 30.3 bits (65), Expect = 6.8 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = +3 Query: 492 APGHESASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL-----EEEKKISLSIRIKPLT 656 A G ES + P F +Q+K + S Q +RN+ E+L E +K R KP T Sbjct: 18 ALGEESGERWSPEFHLQRKLADSSHSEQQ-DRNRVSEELIMVVQEMKKYFPSERRNKPST 76 Query: 657 IEGLS 671 ++ L+ Sbjct: 77 LDALN 81 >BC146781-1|AAI46782.1| 1210|Homo sapiens PER3 protein protein. Length = 1210 Score = 30.3 bits (65), Expect = 6.8 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = +3 Query: 492 APGHESASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL-----EEEKKISLSIRIKPLT 656 A G ES + P F +Q+K + S Q +RN+ E+L E +K R KP T Sbjct: 18 ALGEESGERWSPEFHLQRKLADSSHSEQQ-DRNRVSEELIMVVQEMKKYFPSERRNKPST 76 Query: 657 IEGLS 671 ++ L+ Sbjct: 77 LDALN 81 >BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive matrix 1 protein. Length = 904 Score = 30.3 bits (65), Expect = 6.8 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +2 Query: 170 KPAPKQEGEGDPEFIKRQDQKRSDLDEQ*RNTSTNGANSGPRRRMSSNALK---RSRPSA 340 +P+P++ + + E K Q + RS + R S + +++ PRRR S + R RPS Sbjct: 258 EPSPEKNSKKEKEKEKTQPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSP 317 Query: 341 R 343 R Sbjct: 318 R 318 >BC026102-1|AAH26102.1| 378|Homo sapiens PER3 protein protein. Length = 378 Score = 30.3 bits (65), Expect = 6.8 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = +3 Query: 492 APGHESASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL-----EEEKKISLSIRIKPLT 656 A G ES + P F +Q+K + S Q +RN+ E+L E +K R KP T Sbjct: 18 ALGEESGERWSPEFHLQRKLADSSHSEQQ-DRNRVSEELIMVVQEMKKYFPSERRNKPST 76 Query: 657 IEGLS 671 ++ L+ Sbjct: 77 LDALN 81 >AY493418-1|AAS72879.1| 1201|Homo sapiens growth-inhibiting protein 13 protein. Length = 1201 Score = 30.3 bits (65), Expect = 6.8 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = +3 Query: 492 APGHESASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL-----EEEKKISLSIRIKPLT 656 A G ES + P F +Q+K + S Q +RN+ E+L E +K R KP T Sbjct: 18 ALGEESGERWSPEFHLQRKLADSSHSEQQ-DRNRVSEELIMVVQEMKKYFPSERRNKPST 76 Query: 657 IEGLS 671 ++ L+ Sbjct: 77 LDALN 81 >AL157954-1|CAB76084.1| 1201|Homo sapiens hypothetical protein protein. Length = 1201 Score = 30.3 bits (65), Expect = 6.8 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = +3 Query: 492 APGHESASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL-----EEEKKISLSIRIKPLT 656 A G ES + P F +Q+K + S Q +RN+ E+L E +K R KP T Sbjct: 18 ALGEESGERWSPEFHLQRKLADSSHSEQQ-DRNRVSEELIMVVQEMKKYFPSERRNKPST 76 Query: 657 IEGLS 671 ++ L+ Sbjct: 77 LDALN 81 >AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear matrix protein protein. Length = 820 Score = 30.3 bits (65), Expect = 6.8 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Frame = +2 Query: 170 KPAPKQEGEGDPEFIKRQDQKRSDLDEQ*RNTSTNGANSGPRRRMSSNAL--KRSRPSAR 343 +P+P++ + + E K + + RS + R S + +++ PRRR S+ + R RPS R Sbjct: 258 EPSPEKNSKKEQEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSDKMYSPRRRPSPR 317 >AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear matrix protein protein. Length = 820 Score = 30.3 bits (65), Expect = 6.8 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Frame = +2 Query: 170 KPAPKQEGEGDPEFIKRQDQKRSDLDEQ*RNTSTNGANSGPRRRMSSNAL--KRSRPSAR 343 +P+P++ + + E K + + RS + R S + +++ PRRR S+ + R RPS R Sbjct: 258 EPSPEKNSKKEQEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSDKMYSPRRRPSPR 317 >AB047686-1|BAB32925.2| 1233|Homo sapiens period (Drosophila) homolog 3 hPER3 protein. Length = 1233 Score = 30.3 bits (65), Expect = 6.8 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = +3 Query: 492 APGHESASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL-----EEEKKISLSIRIKPLT 656 A G ES + P F +Q+K + S Q +RN+ E+L E +K R KP T Sbjct: 41 ALGEESGERWSPEFHLQRKLADSSHSEQQ-DRNRVSEELIMVVQEMKKYFPSERRNKPST 99 Query: 657 IEGLS 671 ++ L+ Sbjct: 100 LDALN 104 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 71,408,039 Number of Sequences: 237096 Number of extensions: 1094987 Number of successful extensions: 4440 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4023 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4434 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 7895240574 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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