Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0828.Seq
         (613 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    87   4e-16
UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ...    76   6e-13
UniRef50_UPI0000F342CF Cluster: KIAA1614.; n=2; Bos taurus|Rep: ...    34   2.3  
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    34   2.3  
UniRef50_UPI0000EBD1F0 Cluster: PREDICTED: hypothetical protein;...    33   4.0  
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    33   5.3  
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    33   5.3  
UniRef50_A4S8I4 Cluster: Predicted protein; n=3; Ostreococcus|Re...    33   7.1  
UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, wh...    33   7.1  
UniRef50_Q4P5T7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  

>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 86.6 bits (205), Expect = 4e-16
 Identities = 46/70 (65%), Positives = 46/70 (65%)
 Frame = -3

Query: 497 DAPCSGALSAAGVVVTRSVXXXXXXXXXXXXXXXXXXXXXXXAGFPRQALNRGLPLGFRF 318
           DAPCSGALSAAGVVVTRSV                       AGFPRQALNRGLPLGFRF
Sbjct: 2   DAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFAGFPRQALNRGLPLGFRF 61

Query: 317 SALRHLGPKK 288
           SALRHL PKK
Sbjct: 62  SALRHLDPKK 71


>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 99

 Score = 76.2 bits (179), Expect = 6e-13
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 509 SGKCARNPYLFIFLNTFKYVSAHETITLINASIIL 613
           SGKCARNPYLFIFLNTFKYVSAHETITLINASIIL
Sbjct: 27  SGKCARNPYLFIFLNTFKYVSAHETITLINASIIL 61


>UniRef50_UPI0000F342CF Cluster: KIAA1614.; n=2; Bos taurus|Rep:
           KIAA1614. - Bos Taurus
          Length = 1185

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +1

Query: 163 RVECCSSLEQESTIKERGFQRQRAKNRLSGRGPLREQPPYSGFLGPRCRK 312
           R E  S+ + ES   ER  QRQR    L+ +GPLR +P  + ++   CR+
Sbjct: 462 RFEDESARDAESRYLERLQQRQRQVLSLADQGPLRSKPDLADYIQGGCRR 511


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +2

Query: 2   RPSQQLRSLNGEWQIV 49
           RPSQQLRSLNGEW+++
Sbjct: 57  RPSQQLRSLNGEWRLM 72


>UniRef50_UPI0000EBD1F0 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 217

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 20/45 (44%), Positives = 22/45 (48%)
 Frame = +1

Query: 205 KERGFQRQRAKNRLSGRGPLREQPPYSGFLGPRCRKALNRNPKGS 339
           KE G QR R K    G G      P SG  GPR R+A  R P G+
Sbjct: 145 KESGSQRPRRKKE-QGAGLGARSGPGSGVPGPRAREAQRRPPHGA 188


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 2   RPSQQLRSLNGEWQ 43
           RPSQQLRSLNGEW+
Sbjct: 65  RPSQQLRSLNGEWR 78


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
          Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 2  RPSQQLRSLNGEWQ 43
          RPSQQLRSLNGEW+
Sbjct: 47 RPSQQLRSLNGEWR 60


>UniRef50_A4S8I4 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 1002

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 22/71 (30%), Positives = 36/71 (50%)
 Frame = -3

Query: 362 PRQALNRGLPLGFRFSALRHLGPKKPE*GGCSRSGPRPDRRFFALWRWNPRSLIVDSCSK 183
           PR+ ++RG PL  RF+A+R+   ++P   GC     +  R FFA         + D  S+
Sbjct: 710 PRRRVSRGEPLPVRFAAVRNHTVEQP--SGCDVCAFKALRMFFAKVMHLAARRLGDLASR 767

Query: 182 LEQHSTLSRSI 150
           L   + ++R I
Sbjct: 768 LNLSTDVTRDI 778


>UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_33,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1173

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 156 VYSFDL*GIFPISAYWLKNELI*QKFNANFNKILTLTICHSPFR 25
           +++F L G      +WLKN+    KF++ F ++L L +  + FR
Sbjct: 665 IFNFSLQGALSYIDFWLKNQHFDDKFSSTFTQLLLLALGVTVFR 708


>UniRef50_Q4P5T7 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 779

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 465 GCGGYAQRDRYTCQRPSARSFRFLPFLSRHVRRLSPSSSKSG 340
           G GGY+QR +    R S R+F   P L R + R    S +SG
Sbjct: 292 GSGGYSQRHKSASSRESIRTFFPAPSLPRLISRPGSQSRESG 333


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,140,964
Number of Sequences: 1657284
Number of extensions: 11592962
Number of successful extensions: 26469
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26461
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)