Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0828.Seq
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    25   0.66 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      25   0.66 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      24   1.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   3.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.5  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   3.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   6.2  

>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 589 GYCLMSGYIFECI*KNKQIGVPRTFPRKCHLT 494
           GY    G I E + KN+  G+P  F    H T
Sbjct: 306 GYTTREGMIVEMMRKNETPGMPNDFEEFVHPT 337


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 589 GYCLMSGYIFECI*KNKQIGVPRTFPRKCHLT 494
           GY    G I E + KN+  G+P  F    H T
Sbjct: 306 GYTTREGMIVEMMRKNETPGMPNDFEEFVHPT 337


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 589 GYCLMSGYIFECI*KNKQIGVPRTFPRKCHLT 494
           GY    G I E + KN+  G+P  F    H T
Sbjct: 304 GYTTREGMIVEMMRKNETPGMPNDFEGFVHPT 335


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +3

Query: 213 WIPTPKGEKPSIRAWPXXXXXXLFRFF 293
           W P+ K  KP ++ W       +F  F
Sbjct: 575 WHPSDKSAKPMLKPWQRVLPDGVFVAF 601


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = +1

Query: 442 TLRVTTTPAALNAPLQGASGGTFGEMCAEPLFVYFSKYIQ 561
           T  +TT  A L     GA       M   PLF Y   YIQ
Sbjct: 152 TEEITTHQADLIIEADGAYSTLRRYMQLTPLFEYSQTYIQ 191


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = +1

Query: 442 TLRVTTTPAALNAPLQGASGGTFGEMCAEPLFVYFSKYIQ 561
           T  +TT  A L     GA       M   PLF Y   YIQ
Sbjct: 152 TEEITTHQADLIIEADGAYSTLRRYMQLTPLFEYSQTYIQ 191


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = +1

Query: 442 TLRVTTTPAALNAPLQGASGGTFGEMCAEPLFVYFSKYIQ 561
           T  +TT  A L     GA       M   PLF Y   YIQ
Sbjct: 152 TEEITTHQADLIIEADGAYSTLRRYMQLTPLFEYSQTYIQ 191


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -1

Query: 589 GYCLMSGYIFECI*KNKQIGVPRTFPRKCHLT 494
           GY    G I E + K +  G+P  F    H T
Sbjct: 304 GYTTREGMIVEMMRKTETPGMPNDFEEFVHPT 335


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 274 PPYSGFLGPRCRKALN 321
           PP  GF+GPRC   +N
Sbjct: 287 PP--GFVGPRCEGDIN 300


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -2

Query: 363 SPSSSKSGAP 334
           SPSS+KSG+P
Sbjct: 74  SPSSTKSGSP 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,072
Number of Sequences: 336
Number of extensions: 2676
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)