Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0828.Seq
(613 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 1.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 1.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 1.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 1.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 1.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 1.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 1.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 1.8
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 3.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.1
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 7.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 7.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.5
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 9.5
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 9.5
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 9.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.5
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + + +P+ + RH+GP P
Sbjct: 132 FPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + + +P+ + RH+GP P
Sbjct: 132 FPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + + +P+ + RH+GP P
Sbjct: 132 FPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + + +P+ + RH+GP P
Sbjct: 132 FPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + + +P+ + RH+GP P
Sbjct: 132 FPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + + +P+ + RH+GP P
Sbjct: 132 FPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + + +P+ + RH+GP P
Sbjct: 132 FPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + + +P+ + RH+GP P
Sbjct: 135 FPSRPMGPWVPMQEQIPRFRHIGPSTP 161
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.6 bits (46), Expect = 3.1
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 15/79 (18%)
Frame = +2
Query: 413 ALGRWQV*RSRCA*PPH--PP--------RLMRRYRARQVALSGKCAR--NPYLFIFLNT 556
A+G WQ+ C+ PP PP R R R V+ + +R P F+ +N
Sbjct: 381 AMGHWQMSCVACSPPPRQTPPSRKESGRRRRRRTPRYNSVSKIDRASRIVFPLFFLAINV 440
Query: 557 ---FKYVSAHETITLINAS 604
F Y+S E I N +
Sbjct: 441 FYWFAYLSRSERINYYNVN 459
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 589 GYCLMSGYIFECI*KNKQIGVPRTF 515
G+CL+ FECI + GV R +
Sbjct: 452 GFCLLFLMFFECIAISWAFGVNRFY 476
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 589 GYCLMSGYIFECI*KNKQIGVPRTF 515
G+CL+ FECI + GV R +
Sbjct: 505 GFCLLFLMFFECIAISWAFGVNRFY 529
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 219 ESTFFNSGLLFQTGTTLNPI 160
E + SG L+ TT+NPI
Sbjct: 307 EWLYILSGCLYYFSTTINPI 326
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 536 LFIFLNTFKYVSAHETITLINAS 604
LF+ L+ F V ETI +N++
Sbjct: 605 LFLLLDMFNCVVVEETIPSLNST 627
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + L + + + RH+GP P
Sbjct: 134 FPPRPLGPWISIQEQIPRFRHIGPSTP 160
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + L + + + RH+GP P
Sbjct: 134 FPPRPLGPWISIQEQIPRFRHIGPSTP 160
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + L + + + RH+GP P
Sbjct: 134 FPPRPLGPWISIQEQIPRFRHIGPSTP 160
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP + L + + + RH+GP P
Sbjct: 134 FPPRPLGPWISIQEQIPRFRHIGPSTP 160
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP +++ + + + RH+GP P
Sbjct: 126 FPPRSMGPWISIQEQIPRFRHIGPSTP 152
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP +++ + + + RH+GP P
Sbjct: 126 FPPRSMGPWISIQEQIPRFRHIGPSTP 152
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP +++ + + + RH+GP P
Sbjct: 126 FPPRSMGPWISIQEQIPRFRHIGPSTP 152
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP +++ + + + RH+GP P
Sbjct: 374 FPPRSMEPWISMQEQIPRFRHIGPSTP 400
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -3
Query: 365 FPRQALNRGLPLGFRFSALRHLGPKKP 285
FP +++ + + + RH+GP P
Sbjct: 359 FPPRSMGPWISIQEQIPRFRHIGPSTP 385
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,086
Number of Sequences: 438
Number of extensions: 3945
Number of successful extensions: 28
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -