Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0825.Seq
(631 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 54 1e-07
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 43 2e-04
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 42 3e-04
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 42 3e-04
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 42 5e-04
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 41 7e-04
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.001
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 39 0.004
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 37 0.012
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.012
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.016
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.016
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.021
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.021
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 36 0.027
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.063
SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11) 35 0.063
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 33 0.14
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 33 0.19
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 32 0.33
SB_52305| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.58
SB_798| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_33947| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3) 31 0.58
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 31 1.0
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_45747| Best HMM Match : Peptidase_M13 (HMM E-Value=3.4e-05) 30 1.8
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 29 2.4
SB_39790| Best HMM Match : Phage_Gp15 (HMM E-Value=6.1) 29 3.1
SB_57728| Best HMM Match : Usp (HMM E-Value=3.9e-20) 29 3.1
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.1
SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.1
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 28 5.4
SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_17448| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 28 7.2
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 7.2
SB_54679| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_5619| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 53.6 bits (123), Expect = 1e-07
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKV 91
P VC +R++ +G V+WG+GC G PG+Y D+ WID+ V
Sbjct: 632 PFVCKDPRVTSRFILHGAVSWGVGCARKGQPGIYTDIKKYLNWIDNIV 679
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 603 RTVKEIVIHKDFNKGNLFYDIALLFLETPV 514
R V +I IH D+++ L D+AL+ L TP+
Sbjct: 513 RDVAQICIHPDYHEIKLTNDLALIRLRTPI 542
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKV 91
PLVC E + + G ++WG+GC G GVY D+ +L+ W+ +
Sbjct: 300 PLVCK---EGDVWYLMGAISWGVGCARGGRYGVYADMMDLKYWVQSTI 344
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -3
Query: 449 QVFATGWGKDKFGKEGRYQVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAG-G 273
Q + +GWG + G + ++ + VP+V R+TCQ +++ S CAG G
Sbjct: 233 QCYISGWGHLQEAGHGPW--VLHQAAVPLVSRDTCQKAYNDLH----YKVSSRMRCAGYG 286
Query: 272 EPDKDTAGGTGDRP 231
D G P
Sbjct: 287 AGGIDACQGDSGGP 300
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDD 97
P+VC + R+ +G +WG GC + G GVY V NL W D
Sbjct: 888 PMVCE---SRGRFYIHGATSWGYGCAQPGKFGVYAHVKNLVAWTPD 930
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 201 RYVQYGIVAWGIG-CGEDGTPGVYVDVSNLRTWIDDKVAG 85
RYV G V+WG G C V+ V++ R WID ++G
Sbjct: 259 RYVLQGDVSWGSGRCDSSQMFTVFGRVAHFRNWIDRHMSG 298
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 609 QDRTVKEIVIHKDFNKGNLFYDIALLFLETPV 514
Q VK I+ H +N L DIAL+ L +PV
Sbjct: 136 QTHDVKRIITHPTYNSPQLSNDIALIELSSPV 167
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWI 103
PLVC N++ G+ +WG GC PG+Y ++ L+ W+
Sbjct: 406 PLVCE---NNNKWTLVGVTSWGYGCAHPDYPGIYAKLTELKDWV 446
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGI-GCGEDGTPGVYVDVSNLRTWIDDKVAGK 82
PLVC K R+V G+ +W GC + G GVY DV + WI V+ +
Sbjct: 1977 PLVCE---SKGRWVLMGVTSWSYNGCADSGYAGVYADVVYFKDWIRQTVSSR 2025
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 609 QDRTVKEIVIHKDFNKGNLFYDIALLFLETPV 514
Q+ ++ IV+H +N +L YDIALL L P+
Sbjct: 1861 QNIPIEGIVVHPSYN--DLDYDIALLKLRQPI 1890
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVA 88
P+VC R+ +G +WG GC G GVY V L WI D++A
Sbjct: 89 PMVCE---NGGRFYIHGATSWGYGCAAPGLYGVYAKVKYLLPWIKDEMA 134
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2
Query: 207 KNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKV 91
K R+V GIV+WG GCG G G Y V + +WI+ +
Sbjct: 246 KYRWVSAGIVSWGEGCGIKGKYGFYTRVESYLSWINSTI 284
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 609 QDRTVKEIVIHKDFNKGNLFY-DIALLFLETPV 514
QD K+I++H +F FY DIAL+ L T V
Sbjct: 77 QDILAKDIILHPNFKSLQTFYNDIALVKLRTRV 109
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = -2
Query: 207 KNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKV 91
++R+V G+++WG GCG+ G GVY + N WI +++
Sbjct: 327 QHRHVLLGVISWGDGCGKFGKYGVYTRLFNFIDWILNEI 365
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVA 88
PL C E + YGIV++G+GCG GVY ++ L W+ D ++
Sbjct: 231 PLACS---EGGLWYMYGIVSYGVGCGVANKFGVYSNMYELTDWVRDTIS 276
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 464 RPRRRQVFATGWGKDKFGKEGRYQVIMKKVDVPVVDRNTCQS 339
R +R + GWG+ FG G + +++V V +V R C S
Sbjct: 160 RDLKRDCYVAGWGRRSFG--GEQSLALREVQVHMVPRELCNS 199
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAG 85
PLVC +YV G+V+WG GC GVY+DV +I+ + G
Sbjct: 183 PLVC--SNADGQYVLRGVVSWGEGCARPKKYGVYLDVRRTLPFIEGTIQG 230
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAG 85
PLVC + R+ G+ +WG GC GVY V LR WI+ + G
Sbjct: 220 PLVC--EDTNGRWHLEGVTSWGYGCAAPRMYGVYASVRYLRDWINGVMKG 267
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDD 97
PL C E+ R+ G+V++G CG G+Y D++ L TW+++
Sbjct: 178 PLACE---ERGRWYLTGVVSYGHECGNPHKYGLYADMATLNTWVEN 220
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 201 RYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVA 88
R+ +G +WG GC G GVY V NL W+ +A
Sbjct: 310 RFYIHGATSWGYGCARSGKFGVYAHVKNLIGWVTSGMA 347
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKV 91
P+VC R+ G+V+WG GC G GVY V ++ WI+ +
Sbjct: 284 PMVCE---NNGRFYLDGVVSWGHGCAGRGKFGVYAKVRYVKEWIESYI 328
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWI 103
PLVC N++ G+ +WG GC G GVY V L+ W+
Sbjct: 819 PLVCQ---HGNQWFLTGVTSWGHGCAFAGKYGVYAGVQQLKQWV 859
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -2
Query: 207 KNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAGKG 79
K R+V GIV+WG GCG+ G Y V WI KG
Sbjct: 304 KYRWVSAGIVSWGEGCGQKDKYGFYTRVEPYVHWIIKTAIPKG 346
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWI 103
PLVC +Y K R+ G +WG GC GVY V L+ W+
Sbjct: 483 PLVC--EY-KGRWHIEGATSWGYGCASPNQYGVYAHVRYLKAWV 523
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVA 88
PL C I +R+ G+V+WG C GVY ++ + +W+ D +A
Sbjct: 239 PLSCSIG---SRFYLTGVVSWGHECARPKKYGVYANMMRMTSWVRDTIA 284
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -3
Query: 461 PRRRQVFATGWGKDKFGKEGRYQVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMC 282
P + + TGWG+ G + +K++ VP+V+++ C S + + +H FMC
Sbjct: 109 PAGKMCYLTGWGETVLDS-GVFSPTLKQLKVPLVNKSVCNSNNSYSGI-----IHEQFMC 162
Query: 281 AG-GEPDKD-TAGGTGDRPSC 225
AG + +D G +G SC
Sbjct: 163 AGYNQGGQDGCLGDSGGPLSC 183
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAG 85
PL C E +V G+++WG C GVY DV + +I+ + G
Sbjct: 180 PLSCQT--ESGDWVLTGLMSWGEKCALPDKYGVYTDVRRMLPFIESTLYG 227
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWI 103
PLVC +Y +++ G +WG GC GVY V L+ W+
Sbjct: 139 PLVC--EYNGRWHIE-GATSWGYGCASPNQYGVYAHVRYLKAWV 179
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAGKGYDTR 67
PL C + RY G+V+WG C GVY ++ L W+ K+A K T+
Sbjct: 227 PLACQ---KGGRYYAVGLVSWGDECARAHKFGVYSRMAKLTPWMVSKIAEKEMATK 279
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 35.9 bits (79), Expect = 0.027
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Frame = -2
Query: 237 SPLVCPIDYEKN----RYVQYGIVAWGI-----GCGEDGTPGVYVDVSNLRTWIDDKVAG 85
SPL+ P+ + +N R++ GI++WG+ GC D + YVD+ + WI V
Sbjct: 858 SPLMFPVPHAQNPNVKRWILGGILSWGLNTLTPGCHSDYSHSAYVDIGSYLKWIRSIVKP 917
Query: 84 K 82
K
Sbjct: 918 K 918
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 34.7 bits (76), Expect = 0.063
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = -3
Query: 452 RQVFATGWGKDKFGKEGRYQVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGG 273
+ + TGWG+ +++ PVVD TC +L +F +T +CAGG
Sbjct: 434 KNCYTTGWGRVSGSMMFFMATKLQQARTPVVDHETCA-----IKLDKFAADKTTMICAGG 488
Query: 272 EPDKDTAGGTGDRPSC 225
+G +G C
Sbjct: 489 SGSSACSGDSGGPLVC 504
>SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11)
Length = 326
Score = 34.7 bits (76), Expect = 0.063
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIG-CGEDGTPGVYVDVSNLRTWIDDKVAGKGYDTRSYE 58
P VC RYV G V+WG G C V+ V++ R WID +A + Y+ Y+
Sbjct: 21 PYVCV--QPDGRYVLQGDVSWGSGKCDAKQMFTVFGRVAHFRNWIDHHMADQVYEDVEYK 78
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 216 DYEKNRYVQYGIVAWG--IGCGEDGTPGVYVDVSNLRTWI 103
D K ++ G+V+WG +GCG GVYV V+ WI
Sbjct: 316 DSAKQKWFLGGVVSWGSSLGCGLPNKYGVYVRVTQFLGWI 355
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVY 133
P+VC +Y ++ G+V+WGIGC G GVY
Sbjct: 59 PMVC--EYN-GKFNLEGVVSWGIGCARPGKYGVY 89
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 431 WGKDKFGKEGRYQVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAG 276
WG+ G G ++ +V+VP+V +TC R LH + +CAG
Sbjct: 2 WGRTAEG--GSSPTVLMQVEVPIVSASTCSRAYSR--------LHESMVCAG 43
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWID 100
P VC ++ G+ +WG GC G+Y +V WI+
Sbjct: 413 PFVCTNPENPRQWTLVGVTSWGKGCARALKYGIYANVRRYLHWIN 457
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = -3
Query: 452 RQVFATGWGKDKFGKEGRYQVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGG 273
+ + TGWG+ + + G ++++ +P+V + TC + +RR + + S +C G
Sbjct: 1454 KNCYITGWGRTGYNRPGAS--VLQEAMMPIVSQQTCAAAMRRWGV-----VTSRMICGGF 1506
Query: 272 EPDKDTAGGTGD 237
+G GD
Sbjct: 1507 GAGSTISGCFGD 1518
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2
Query: 609 QDRTVKEIVIHKDFNKGNLFYDIALLFLETP 517
QD TV+++++H ++ + D+ALL L P
Sbjct: 1401 QDFTVRQVIVHPNYRRQTTDSDVALLRLSHP 1431
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 32.3 bits (70), Expect = 0.33
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -2
Query: 234 PLVCPIDYEKN-RYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAGKGYD 73
PLVC E+N ++ YG+V++G G E + VY VSN WI K AG D
Sbjct: 134 PLVC----ERNGQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLDWI-TKRAGSCVD 183
>SB_52305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 52 LGLVGSSIVSLAGDLVVDPGPQVRDVHVNSWSAVLSAAYAPGYDAVLDIAI 204
+G+ S++ L+GD+ ++PGP ++V+S S+ S Y D + + +I
Sbjct: 80 VGICAFSLIILSGDISLNPGPFGNSMNVSS-SSAFSTTYTDDSDVLSESSI 129
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 443 FATGWGKDKFGKEGRYQVIMKKVDVPVVDRNTCQS 339
+ATGWG G ++K+ +PVV+R CQ+
Sbjct: 480 YATGWGLTVGGDWKSQSDVLKQTPLPVVNRQECQT 514
>SB_798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 52 LGLVGSSIVSLAGDLVVDPGPQVRDVHVNSWSAVLSAAYAPGYDAVLDIAI 204
+G+ S++ L+GD+ ++PGP ++V+S S+ S Y D + + +I
Sbjct: 80 VGICAFSLIILSGDISLNPGPFGNSMNVSS-SSAFSTTYTDDSDVLSESSI 129
>SB_33947| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3)
Length = 338
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 52 LGLVGSSIVSLAGDLVVDPGPQVRDVHVNSWSAVLSAAYAPGYDAVLDIAI 204
+G+ S++ L+GD+ ++PGP ++V+S S+ S Y D + + +I
Sbjct: 80 VGICAFSLIILSGDISLNPGPFGNSMNVSS-SSAFSTTYTDDSDVLSESSI 129
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIG-CGEDGTPGVYVDVSNLRTWI 103
PL+C +++V +G+ +WG C V+ VSN WI
Sbjct: 310 PLMCKAGDRWSKWVLHGVTSWGDSTCDGRAAYSVFTKVSNFVQWI 354
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2
Query: 612 YQDRTVKEIVIHKDFNKGNLFYDIALLFLETPV 514
YQ VK++V + FN+ + DIALL LE PV
Sbjct: 12 YQSIKVKKLVYNPGFNERHYRNDIALLELERPV 44
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAG 85
PLVC E R+V GIV+WG V+ V N WI+ +AG
Sbjct: 133 PLVCN---EAGRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWIETILAG 179
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -3
Query: 476 GQGARPRRRQVFATGWGKDKFGKEGRYQVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLH 297
G A P + + TGWG+ + + + + VP+VD TC+ L+ F+
Sbjct: 54 GDRANPGLK-CYITGWGRYHSTITNPAKSLRQSL-VPLVDHVTCKRGLKE-----FYLDE 106
Query: 296 STFMCAGGEPDKDTAGGTGDRPSC 225
T MC GG G +G C
Sbjct: 107 ETMMCVGGAGSSACNGDSGGPLVC 130
>SB_45747| Best HMM Match : Peptidase_M13 (HMM E-Value=3.4e-05)
Length = 168
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = -2
Query: 222 PIDYEKNRYVQYGIVAWGIGC----GEDGTPGVYVDVSNLRTW 106
P+D K++Y++YG + IG G DGT +Y NLR W
Sbjct: 73 PVD--KDQYLKYGAIGMVIGHEITHGFDGTGRLYDKYGNLREW 113
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -2
Query: 234 PLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAG 85
PLVC E R+V GIV+WG V+ V N WI+ +AG
Sbjct: 593 PLVCN---EAGRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWIETILAG 639
>SB_39790| Best HMM Match : Phage_Gp15 (HMM E-Value=6.1)
Length = 235
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 377 VDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDKDTAGGTGDR 234
+D P + N + Q+ R F++ +T +GGE K AGG G R
Sbjct: 98 LDTPEIQSNLLKGQIIGVRQ---FRIRTTSTPSGGEEKKRAAGGRGGR 142
>SB_57728| Best HMM Match : Usp (HMM E-Value=3.9e-20)
Length = 744
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 426 PPTSGEXLTPAGARSLAGGRHATPTFGANLLESRGTTELCRRTGSP 563
PP + ++P G L GRH TP + GT +CR G+P
Sbjct: 24 PPLTHGGMSPHGTVRL--GRHGTPPLTHGGMSPHGTVPICRH-GTP 66
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 186 GIVAWGIGCGEDGTPGVYVDV 124
G+ +WG GC + G GVY D+
Sbjct: 934 GLSSWGEGCAQKGKFGVYADL 954
>SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 88 GDLVVDPGPQVRDVHVNSWSAVLSAA-YAPGYDAV 189
GD VV P PQ D+ +W LS+ Y P YD V
Sbjct: 595 GDFVVRP-PQRIDLRYGNWEVGLSSIIYQPSYDIV 628
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 609 QDRTVKEIVIHKDFNKGNLFYDIALLFLETPV 514
Q+ + ++ HKDF+ +L D+ALL L+ P+
Sbjct: 142 QEFRLTKLFKHKDFSMSHLKNDVALLKLDNPI 173
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = -3
Query: 434 GWGKDKFGKEGRYQVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDK 261
GWG + ++G+ I+++ +P+VD TC S+ RR R RF + +CAG PD+
Sbjct: 367 GWGNVR--EDGQSTSILQQAVMPLVDDATC-SRNRRLR-SRFNA--KSMLCAG--PDR 416
>SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = -1
Query: 598 SQGNRDTQGLQ*GEPVLRHSSVVPRDSSRFAPNVGVACLPPARERAPAGVRXSPLVGGRT 419
S G RD +G H RD R LPP RER+ G+R S + G++
Sbjct: 529 SSGTRDARGQDNTPKASAHGCESGRDRDRR--------LPPTRERSEKGIRLSSVWQGQS 580
Query: 418 SSGRK 404
+ ++
Sbjct: 581 RTSKR 585
>SB_17448| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 890
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 157 SAAYAPGYDAVLDIAILLIVY---GAHEGRSPVPPAVSLSGSPPAHMNVECNWKNRPSRV 327
++ Y PG+D LDIA+ L V G PV ++G+ H+++ N + RP
Sbjct: 80 TSLYIPGHDPPLDIAVFLDVLKNPGPDLVSRPVLYRNEIAGNSNRHLDLH-NRQTRPVNY 138
Query: 328 LLNWLWQV 351
N L+++
Sbjct: 139 SRNCLFKL 146
>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 625
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 103 DPGPQVRDVHVNSWSAVLSAAYAPGYDAVLDIAILLIVYGAHEG 234
+PGPQ D + WS V S + G V + L G ++G
Sbjct: 413 EPGPQRYDPETDEWSIVSSMLHRRGGVGVAGLEGYLYAVGGNDG 456
>SB_54679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 198 YVQYGIVAWGIGCGEDGTPGVYV 130
YV YG++ WG+G G TP + V
Sbjct: 119 YVTYGLL-WGVGSGLSFTPSIIV 140
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 609 QDRTVKEIVIHKDFNKGNLFYDIALLFLETPV 514
Q + +I+ H +N + DIALL L TPV
Sbjct: 175 QSLRLSQIIEHPKYNDRRIVNDIALLELATPV 206
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 609 QDRTVKEIVIHKDFNKGNLFYDIALLFLETPV 514
Q + +I+ H +N + DIALL L TPV
Sbjct: 504 QSLRLSQIIEHPKYNDRRIVNDIALLELATPV 535
>SB_5619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 174 WGIGCGEDGTPGVYVDVSN-LRTWIDDKVA 88
W IG G+ TP +V N LR W+ + V+
Sbjct: 319 WAIGTGKTATPQQAQEVHNQLRAWLKENVS 348
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,697,855
Number of Sequences: 59808
Number of extensions: 345613
Number of successful extensions: 955
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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