Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0824.Seq
         (583 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY050229-1|AAK84928.1|  486|Drosophila melanogaster SD01615p pro...    31   1.1  
AF364549-3|AAK52056.1|  425|Drosophila melanogaster envelope pro...    31   1.1  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   4.6  
BT021413-1|AAX33561.1|  219|Drosophila melanogaster LD05272p pro...    28   8.0  
AE014298-2830|AAF48945.2|  219|Drosophila melanogaster CG32536-P...    28   8.0  

>AY050229-1|AAK84928.1|  486|Drosophila melanogaster SD01615p
           protein.
          Length = 486

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 66  GVPKREDYELVEFVIPPLIDARSS-LKPNGSASTRI*GLT-TLTKLYPTTSS 215
           G P  ED+E V+F    L+DA +S ++ N     RI  LT T+ KL   + S
Sbjct: 111 GTPDAEDFEKVKFTEARLVDAHNSQIEINTKTQVRINELTDTINKLLKISKS 162


>AF364549-3|AAK52056.1|  425|Drosophila melanogaster envelope
           protein protein.
          Length = 425

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 66  GVPKREDYELVEFVIPPLIDARSS-LKPNGSASTRI*GLT-TLTKLYPTTSS 215
           G P  ED+E V+F    L+DA +S ++ N     RI  LT T+ KL   + S
Sbjct: 50  GTPDAEDFEKVKFTEARLVDAHNSQIEINTKTQVRINELTDTINKLLKISKS 101


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 316   PSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAY 429
             P+ QP  P   I  +P +    PSL  G + +P   +Y
Sbjct: 19511 PTVQPKPPVSGIINIPSVPQPVPSLTPGVINLPSEPSY 19548


>BT021413-1|AAX33561.1|  219|Drosophila melanogaster LD05272p
           protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 442 LRNQNRQSRPASQPPLRPATATIPA 368
           LR + R+ R   QPP+RPA  T+ A
Sbjct: 185 LREKRRELRHQRQPPVRPAPPTVGA 209


>AE014298-2830|AAF48945.2|  219|Drosophila melanogaster CG32536-PA
           protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 442 LRNQNRQSRPASQPPLRPATATIPA 368
           LR + R+ R   QPP+RPA  T+ A
Sbjct: 185 LREKRRELRHQRQPPVRPAPPTVGA 209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,830,157
Number of Sequences: 53049
Number of extensions: 522134
Number of successful extensions: 1463
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)