Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0823.Seq
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.72 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   3.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   3.8  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 613  GCSGRARFKRARYICYKTFLHCI 545
            GCS R  F     IC+   L+C+
Sbjct: 1110 GCSNRCFFPSKIRICWNVLLNCV 1132


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 197 APTLLRRSLLLKCTSFNFLLTVRAIRTVTNITI 295
           +PT+++  L  +  SF FL+ V  + + T   +
Sbjct: 65  SPTIMKFVLSFRTGSFTFLMVVAVLSSGTTFKL 97


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 197 APTLLRRSLLLKCTSFNFLLTVRAIRTVTNITI 295
           +PT+++  L  +  SF FL+ V  + + T   +
Sbjct: 65  SPTIMKFVLSFRTGSFTFLMVVAVLSSGTTFKL 97


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 224 LLKCTSFNFLLTVRAIRT 277
           +L CTS NF+L +  + T
Sbjct: 158 VLMCTSMNFVLLIGDLHT 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,835
Number of Sequences: 336
Number of extensions: 2393
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)