Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0823.Seq
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    26   0.90 
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    26   0.90 
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    26   0.90 
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   3.7  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 487 NNPNLNRYYALNVIINQFFVCNVRTFYNKY 576
           +NPN NR     ++ +  F CNV  F  +Y
Sbjct: 542 DNPNSNRDALDKMVGDYHFTCNVNEFAQRY 571


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 487 NNPNLNRYYALNVIINQFFVCNVRTFYNKY 576
           +NPN NR     ++ +  F CNV  F  +Y
Sbjct: 542 DNPNSNRDALDKMVGDYHFTCNVNEFAQRY 571


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 487 NNPNLNRYYALNVIINQFFVCNVRTFYNKY 576
           +NPN NR     ++ +  F CNV  F  +Y
Sbjct: 428 DNPNSNRDALDKMVGDYHFTCNVNEFAQRY 457


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 11  LTLTNRFERFHSFAIGGC 64
           L L+NRF R+  F +G C
Sbjct: 263 LILSNRFGRYQPFLVGYC 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,529
Number of Sequences: 2352
Number of extensions: 10717
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)