BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0822.Seq
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z24725-1|CAA80852.1| 720|Homo sapiens mitogen inducible gene mi... 43 0.001
BC017327-1|AAH17327.1| 680|Homo sapiens pleckstrin homology dom... 43 0.001
AF443279-1|AAN75823.1| 680|Homo sapiens mitogen inducible 2 pro... 43 0.001
BC015584-1|AAH15584.1| 663|Homo sapiens UNC-112 related protein... 41 0.005
BC013366-1|AAH13366.1| 663|Homo sapiens UNC-112 related protein... 41 0.005
BC004347-1|AAH04347.2| 663|Homo sapiens UNC-112 related protein... 41 0.005
AY093952-1|AAM19737.1| 667|Homo sapiens UNC-112 related protein... 41 0.005
AY093951-1|AAM19736.1| 663|Homo sapiens UNC-112 related protein... 41 0.005
AK093719-1|BAC04220.1| 663|Homo sapiens protein ( Homo sapiens ... 41 0.005
BC035882-1|AAH35882.1| 495|Homo sapiens C20orf42 protein protein. 35 0.30
AY137240-1|AAM94174.1| 677|Homo sapiens Kindler syndrome protei... 35 0.30
AL118505-3|CAI42167.1| 146|Homo sapiens chromosome 20 open read... 35 0.30
AL118505-2|CAC03433.2| 677|Homo sapiens chromosome 20 open read... 35 0.30
AF443278-1|AAN75822.1| 677|Homo sapiens URP1 protein. 35 0.30
AB105105-1|BAD12269.1| 677|Homo sapiens DTGCU2 protein. 35 0.30
>Z24725-1|CAA80852.1| 720|Homo sapiens mitogen inducible gene mig-2
protein.
Length = 720
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 448 EFKKDWSDHALWWPTRNKWLSDQNTPWTM 534
+ KKDWSDHALWW + WL T WT+
Sbjct: 93 DVKKDWSDHALWWEKKRTWL--LKTHWTL 119
>BC017327-1|AAH17327.1| 680|Homo sapiens pleckstrin homology domain
containing, family C (with FERM domain) member 1
protein.
Length = 680
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 448 EFKKDWSDHALWWPTRNKWLSDQNTPWTM 534
+ KKDWSDHALWW + WL T WT+
Sbjct: 53 DVKKDWSDHALWWEKKRTWL--LKTHWTL 79
>AF443279-1|AAN75823.1| 680|Homo sapiens mitogen inducible 2
protein.
Length = 680
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 448 EFKKDWSDHALWWPTRNKWLSDQNTPWTM 534
+ KKDWSDHALWW + WL T WT+
Sbjct: 53 DVKKDWSDHALWWEKKRTWL--LKTHWTL 79
>BC015584-1|AAH15584.1| 663|Homo sapiens UNC-112 related protein 2
protein.
Length = 663
Score = 40.7 bits (91), Expect = 0.005
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 454 KKDWSDHALWWPTRNKWLSDQNTPWTM 534
K+DWSDHA+WW + +WL T WT+
Sbjct: 56 KQDWSDHAIWWEQKRQWL--LQTHWTL 80
>BC013366-1|AAH13366.1| 663|Homo sapiens UNC-112 related protein 2
protein.
Length = 663
Score = 40.7 bits (91), Expect = 0.005
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 454 KKDWSDHALWWPTRNKWLSDQNTPWTM 534
K+DWSDHA+WW + +WL T WT+
Sbjct: 56 KQDWSDHAIWWEQKRQWL--LQTHWTL 80
>BC004347-1|AAH04347.2| 663|Homo sapiens UNC-112 related protein 2
protein.
Length = 663
Score = 40.7 bits (91), Expect = 0.005
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 454 KKDWSDHALWWPTRNKWLSDQNTPWTM 534
K+DWSDHA+WW + +WL T WT+
Sbjct: 56 KQDWSDHAIWWEQKRQWL--LQTHWTL 80
>AY093952-1|AAM19737.1| 667|Homo sapiens UNC-112 related protein 2
long form URP2LF protein.
Length = 667
Score = 40.7 bits (91), Expect = 0.005
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 454 KKDWSDHALWWPTRNKWLSDQNTPWTM 534
K+DWSDHA+WW + +WL T WT+
Sbjct: 56 KQDWSDHAIWWEQKRQWL--LQTHWTL 80
>AY093951-1|AAM19736.1| 663|Homo sapiens UNC-112 related protein 2
short form URP2SF protein.
Length = 663
Score = 40.7 bits (91), Expect = 0.005
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 454 KKDWSDHALWWPTRNKWLSDQNTPWTM 534
K+DWSDHA+WW + +WL T WT+
Sbjct: 56 KQDWSDHAIWWEQKRQWL--LQTHWTL 80
>AK093719-1|BAC04220.1| 663|Homo sapiens protein ( Homo sapiens
cDNA FLJ36400 fis, clone THYMU2009792, moderately
similar to Mitogen inducible gene mig-2. ).
Length = 663
Score = 40.7 bits (91), Expect = 0.005
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 454 KKDWSDHALWWPTRNKWLSDQNTPWTM 534
K+DWSDHA+WW + +WL T WT+
Sbjct: 56 KQDWSDHAIWWEQKRQWL--LQTHWTL 80
>BC035882-1|AAH35882.1| 495|Homo sapiens C20orf42 protein protein.
Length = 495
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 457 KDWSDHALWWPTRNKWLSDQNTPWTM 534
+DWSD ALWW ++ WL T WT+
Sbjct: 54 QDWSDFALWWEQKHCWL--LKTHWTL 77
>AY137240-1|AAM94174.1| 677|Homo sapiens Kindler syndrome protein
protein.
Length = 677
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 457 KDWSDHALWWPTRNKWLSDQNTPWTM 534
+DWSD ALWW ++ WL T WT+
Sbjct: 54 QDWSDFALWWEQKHCWL--LKTHWTL 77
>AL118505-3|CAI42167.1| 146|Homo sapiens chromosome 20 open reading
frame 42 protein.
Length = 146
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 457 KDWSDHALWWPTRNKWLSDQNTPWTM 534
+DWSD ALWW ++ WL T WT+
Sbjct: 54 QDWSDFALWWEQKHCWL--LKTHWTL 77
>AL118505-2|CAC03433.2| 677|Homo sapiens chromosome 20 open reading
frame 42 protein.
Length = 677
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 457 KDWSDHALWWPTRNKWLSDQNTPWTM 534
+DWSD ALWW ++ WL T WT+
Sbjct: 54 QDWSDFALWWEQKHCWL--LKTHWTL 77
>AF443278-1|AAN75822.1| 677|Homo sapiens URP1 protein.
Length = 677
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 457 KDWSDHALWWPTRNKWLSDQNTPWTM 534
+DWSD ALWW ++ WL T WT+
Sbjct: 54 QDWSDFALWWEQKHCWL--LKTHWTL 77
>AB105105-1|BAD12269.1| 677|Homo sapiens DTGCU2 protein.
Length = 677
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 457 KDWSDHALWWPTRNKWLSDQNTPWTM 534
+DWSD ALWW ++ WL T WT+
Sbjct: 54 QDWSDFALWWEQKHCWL--LKTHWTL 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,064,626
Number of Sequences: 237096
Number of extensions: 1766577
Number of successful extensions: 2387
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2387
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -