Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0822.Seq
         (674 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118556-1|AAM49925.1|  708|Drosophila melanogaster LD36089p pro...    52   5e-07
AE014296-764|AAG22245.1|  708|Drosophila melanogaster CG14991-PB...    52   5e-07
AE014296-763|AAF47838.1|  708|Drosophila melanogaster CG14991-PA...    52   5e-07
AY061360-1|AAL28908.1|  715|Drosophila melanogaster LD28629p pro...    52   1e-06
AE014296-2863|AAF49380.1|  715|Drosophila melanogaster CG7729-PA...    52   1e-06

>AY118556-1|AAM49925.1|  708|Drosophila melanogaster LD36089p
           protein.
          Length = 708

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +1

Query: 433 NLVVPEFKKDWSDHALWWPTRNKWLS 510
           NLV PE  KDWSDHALWWP +N WL+
Sbjct: 38  NLVDPELPKDWSDHALWWPAKNIWLT 63


>AE014296-764|AAG22245.1|  708|Drosophila melanogaster CG14991-PB,
           isoform B protein.
          Length = 708

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +1

Query: 433 NLVVPEFKKDWSDHALWWPTRNKWLS 510
           NLV PE  KDWSDHALWWP +N WL+
Sbjct: 38  NLVDPELPKDWSDHALWWPAKNIWLT 63


>AE014296-763|AAF47838.1|  708|Drosophila melanogaster CG14991-PA,
           isoform A protein.
          Length = 708

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +1

Query: 433 NLVVPEFKKDWSDHALWWPTRNKWLS 510
           NLV PE  KDWSDHALWWP +N WL+
Sbjct: 38  NLVDPELPKDWSDHALWWPAKNIWLT 63


>AY061360-1|AAL28908.1|  715|Drosophila melanogaster LD28629p
           protein.
          Length = 715

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/25 (80%), Positives = 20/25 (80%)
 Frame = +1

Query: 436 LVVPEFKKDWSDHALWWPTRNKWLS 510
           LV PE  KDWSDHALWWP RN WLS
Sbjct: 39  LVDPENPKDWSDHALWWPARNVWLS 63


>AE014296-2863|AAF49380.1|  715|Drosophila melanogaster CG7729-PA
           protein.
          Length = 715

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/25 (80%), Positives = 20/25 (80%)
 Frame = +1

Query: 436 LVVPEFKKDWSDHALWWPTRNKWLS 510
           LV PE  KDWSDHALWWP RN WLS
Sbjct: 39  LVDPENPKDWSDHALWWPARNVWLS 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,425,314
Number of Sequences: 53049
Number of extensions: 497038
Number of successful extensions: 945
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)