Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0821.Seq
         (816 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.9  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -3

Query: 442 PTVTM-TVSTLCGQ*ADYPQVTPPLT 368
           P V++ T S LCG    +PQ T P+T
Sbjct: 75  PVVSLSTCSMLCGSTQLWPQPTGPVT 100


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 663 LGRRRTCLQHHLFQRRHKYYITNTPIFTVLSILRI 767
           +GR+    QH        +YIT+  + +V S+ RI
Sbjct: 42  IGRKGELKQHKSDYFYFSFYITSYTLLSVYSLFRI 76


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 663 LGRRRTCLQHHLFQRRHKYYITNTPIFTVLSILRI 767
           +GR+    QH        +YIT+  + +V S+ RI
Sbjct: 42  IGRKGELKQHKSDYFYFSFYITSYTLLSVYSLFRI 76


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 549 DALKTHDIQKSI*NNTKLSTVTL 481
           D LK  D+Q  + +  KLST+ L
Sbjct: 20  DELKNEDVQLRLNSIKKLSTIAL 42


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 448  QQPTVTMTVSTLCGQ*ADYPQVTPPLT 368
            +QP    T +TL  Q      V+PPLT
Sbjct: 1101 EQPPDKATCTTLTAQTIRVSWVSPPLT 1127


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 668 TPTDLPTASSVSAPTQILHYKHS 736
           TPT +PT S+ ++P  +   K S
Sbjct: 220 TPTGIPTPSTSASPPTVNIKKES 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,982
Number of Sequences: 336
Number of extensions: 3394
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)