Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0820.Seq
         (782 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            28   0.28 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            28   0.28 
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   8.1  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   8.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +3

Query: 420  YIDSKGMPL-SLYNFLLMVEINLVLIC 497
            Y+DS+G PL SLY   LM+E+ L L+C
Sbjct: 2175 YLDSQGRPLKSLY---LMLELRLPLVC 2198


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +3

Query: 420  YIDSKGMPL-SLYNFLLMVEINLVLIC 497
            Y+DS+G PL SLY   LM+E+ L L+C
Sbjct: 2176 YLDSQGRPLKSLY---LMLELRLPLVC 2199


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 338 FTHNGQKTRYYSHYTLNYPFTLLRWVQVNS 249
           FTH+  K  Y++  + N+  TL  W Q N+
Sbjct: 82  FTHSVTKFIYFAVNSENFYRTLAIWNQTNT 111


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 338 FTHNGQKTRYYSHYTLNYPFTLLRWVQVNS 249
           FTH+  K  Y++  + N+  TL  W Q N+
Sbjct: 82  FTHSVTKFIYFAVNSENFYRTLAIWNQTNT 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,432
Number of Sequences: 2352
Number of extensions: 13163
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)