Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0820.Seq
         (782 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g22420.2 68416.m02830 protein kinase family protein contains ...    28   6.1  
At3g22420.1 68416.m02829 protein kinase family protein contains ...    28   6.1  

>At3g22420.2 68416.m02830 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 627

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3

Query: 213 VCKQPIELSATPGTS 169
           +C+ PIE+S TPGTS
Sbjct: 594 ICETPIEISLTPGTS 608


>At3g22420.1 68416.m02829 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 568

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3

Query: 213 VCKQPIELSATPGTS 169
           +C+ PIE+S TPGTS
Sbjct: 535 ICETPIEISLTPGTS 549


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,742,707
Number of Sequences: 28952
Number of extensions: 249822
Number of successful extensions: 292
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)